Typha angustifolia (narrow-leaf cattail): 140773020
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Entry
140773020 CDS
T11061
Name
(RefSeq) uncharacterized protein isoform X1
Organism
tang Typha angustifolia (narrow-leaf cattail)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MATH_2
MATH
SYCE1
CALCOCO1
CCDC89
CCDC57_N
AMN1_helical
Motif
Other DBs
NCBI-GeneID:
140773020
NCBI-ProteinID:
XP_072971432
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All DBs
Position
13:join(12810202..12811417,12811855..12812334,12812427..12812728,12816183..12816893,12816976..12817254,12817438..12817599,12817704..12818639,12818738..12818953,12819538..12819807,12822530..12822868)
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AA seq
1636 aa
AA seq
DB search
MKPNHPPSDPSPSSSSSSDPDGGGAVVIERRGDHSAVCRWSVPGFPRIRSHALYSRYFDV
GGFDCRLIVYPKGDSQALPGYLSVYLQIVDPKSGSSSSSSSRWDRFASYRLAVSNHLDDS
KSVARESWHRFSSKKKSHGWCDFIPFASVLDPRSGFLASPHDSLLVAADILLLHESVSFS
RDGGGGGEPDVLGGKFTWKVHNFGLFREMIRNQKIMSPVFPAGDCSLRISVYQSAVAGVE
YLSMCLESKDTEKAAPERSCWCLFRMSVLSQRPGGSHVHRDSYGRFAAENKGGDNTSLGW
NDYMRMADFTAVDSGFLMDDTAVFSASFHVIKESNTFSKNHPGSGSVGRAGARKSDGHFG
KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEV
TDSRNTTSDWSCFVSHRLSVINQKVEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQD
AGFLVQDTVVFSAEVLILKETSIMQEISDPESEGCSVSPSSHIDTIWKRGSFTWKVENFL
SFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQSSGSDPEKNFWVRYKMAI
VNQKNPAKTVWKESSICTKTWNNSVLQFMKVSDMLESDAGFLVRDTVVFICEIMDCCPWF
EFSDLEVLASEDDQDALSTDPDELIESDDSEGISGDEEDMFRNILSRAGFHLTYEENHSQ
PQVTLTDASAIAGFLTSLRVYLDHPAKVKRMLLPTKLSGNSGSKKDVTRGDSNSASLISL
LMGVKVLEQAIIDLLLDIMVECCQPSEGRPRYDSSEASSKPSPGSNGASTPPEPIGESEV
AECTRSHVYERLETGVDEITHSHAVQSSEPSTNDKTNIEQSTFPPETSASDLQAEDSFGR
VPKTKWPEQSEELLGLIINSLRALDSAVPQGCPEPRRRPQSVQKIALVLDKAPKILQPEL
IALVPKLVDHSEHPLAACALLDHLQKPEAEPSLRLPVFGALSQLEFGSEVWERVLVQAFE
LLTDSNDEPLVAAISFVFKAASQCQHLPQAARAVRSRLKSLGTEVPHCVLDVLSKTVHAW
ADVAEAILRDIDSDCEFDGNCMPSPCGTFSCGVNGFSAEGMYAGEEQVVHGCHHLSDVYI
LIEMLSMPGLFVEVSQVFERALLRGAIRLQSVAMVLERRHSQRLSGKSRSVVDDSQNKQV
LVDGQFQPLPIQEDDFTSVLSLGEVLSLSRDTRVQDFVRMLYAIMFKIYVEDHYRYRILK
GLVERATNTSESCRVVDIDMDVLVFLVREEEGIARPVLNMMREVAEVAQVDRANLWHQIC
AIEDENMRFREEKEEEISNLTREKAALSQRLSESEASTSHLKSELKSETDRFGREKRELS
DQILEVENQMEWLRSEKDEQIAKISADKKVLQDRLHEAEAQLSQLKSRKRDELKLMQRVV
KEKNALAERLKNAEAARKRFDEELKRYATETVTREEVRQSLEDEVRRLTQTVGQTEGEKR
EKEEQVARCEAYIDGMEAKLQACQQYIHTLEASLQEEMSRHAPLYGVGVEALSMKELETL
TRIHEDGLRQIHAIQQRKGSSNSLVSGHSLPQVHGLFPAAPPVAVGLPSSIIPNGVGIQG
NGHMNGAVGPPWFNPT
NT seq
4911 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccaatcatcccccctccgacccttctccttcttcttcttcctcgtccgacccc
gacggaggtggggccgtcgtcatagagcgccgcggggaccactccgccgtttgccggtgg
tccgtaccaggcttcccccgcatccgatcccacgcgctgtacagccgatacttcgacgtc
ggcggcttcgactgccgcctcatcgtctaccctaaaggcgactcccaggccctccctgga
tacctctccgtgtacctccagatcgtcgaccccaagagcggctcctcctcgtcgtcgtcc
tcccgctgggaccgcttcgcgagctaccgcctcgccgtatccaaccacctcgacgactcc
aagtccgtcgctcgcgagtcctggcatcgcttctcctccaagaagaagtcccacggatgg
tgcgacttcatccccttcgcctccgtcctcgacccccgctctgggtttttggcctcgccg
cacgactccctcctcgtcgccgccgacatcctcctcctccacgagtccgtctccttctcc
cgcgacggcggcggcgggggggagcccgacgtcctcgggggaaagttcacctggaaggtg
cataatttcggtcttttccgggagatgattcggaaccagaagatcatgagcccggtgttc
ccggcaggcgattgcagtttaaggatcagcgtgtaccagagcgccgtagctggggtggag
tacctttctatgtgtctcgagagcaaggacaccgagaaggccgcgccggagcgcagctgc
tggtgcctgttccggatgtctgtgctcagccagcggcctgggggcagccatgtgcacagg
gactcgtatgggaggttcgccgccgagaataagggtggggataatactagcctaggatgg
aacgattacatgcggatggccgacttcacggcggtagattcagggttcctcatggatgat
accgctgttttcagtgcgtcattccatgtgatcaaggagtcgaacacctttagcaagaat
catcctgggagtggcagcgtggggagggcaggcgcccggaagtccgatgggcactttggt
aaattcacatggcggatcgagaacttcacaaggctcaaggaccttctcaagaagaggaag
attacggggctctgcattaagagccgcaggttccagattgggaacagggactgccgcctc
attgtttatccaaggggtcagtctcagccaccatgccacctctccgtgttcttggaagtt
acggactcccgaaacacaacaagtgattggagctgtttcgtgagtcaccggttgtcagtt
atcaatcagaaagtggaagagaaatcagttaccaaggaatctcagaatcgctattctaag
gctgcaaaggactggggctggcgtgagtttgtgaccctgactagtctcttcgaccaggat
gctggatttcttgttcaggacactgttgtgttctctgcagaggttcttatattgaaggag
acttcaataatgcaagaaattagtgacccagagtctgaagggtgcagtgtgagcccgagt
tctcacattgataccatttggaagagagggtcttttacttggaaggtggagaatttctta
tctttcaaggagattatggagaccagaaaaatcttcagcaaattctttcaagctggtggt
tgtgagctgcgaataggtgtgtatgagtcatttgatacaatttgtatatacttggagagt
gatcagtcatccgggagtgacccagaaaagaacttctgggttcgttataaaatggctata
gttaatcagaagaatcctgcaaaaactgtttggaaagagtcctctatctgtacaaaaaca
tggaacaattcggttctccagtttatgaaagtctcagacatgttggagtcagacgcaggc
tttcttgttcgtgacacagttgtttttatttgtgaaatcatggattgctgtccctggttt
gaattctctgatctggaggtgcttgcttcggaggatgatcaggatgcgctgtcaacagac
ccagatgaacttattgagtctgacgatagtgaaggtattagtggagatgaggaagacatg
ttccgaaacatcttgtcgagagctggctttcatcttacatatgaagagaatcattctcag
ccccaggttactctaactgatgctagtgcaattgctggatttttgactagtctgcgagtt
tatctcgatcatcctgctaaagttaaacgtatgcttcttccaaccaagctatctgggaac
tcaggcagcaagaaagatgtaacaaggggtgattcaaactcagcaagtctgataagtttg
ttgatgggtgttaaagtcttggaacaagctattattgatttacttctagatataatggtg
gaatgctgccaaccttcagaaggaagaccaagatatgattcttctgaagcaagctcaaaa
ccttctcctggttcaaatggagctagcactccaccagagcccattggcgaaagtgaagtt
gcagagtgcacacggagtcatgtgtatgagaggttggaaactggagtagatgaaattact
catagtcatgcagtacaaagttcggagccgagcacaaatgacaagaccaacatagaacaa
tctacttttcctccagagacctctgctagtgatctccaagccgaggatagttttggtcga
gttcccaagacaaaatggcccgaacagtcagaggaacttttagggttaattataaattct
ttgagggcactggacagtgctgtgccacaaggatgccctgaaccaagaagacggcctcaa
tcagtgcagaagattgctcttgtgttagataaagctccaaaaattcttcagcccgagttg
attgcccttgtgcctaaattggttgatcattcagaacatccacttgctgcttgtgcactt
ctagatcaccttcaaaagccagaagctgaaccttcattgcggttaccggtttttggtgct
ctaagtcaattagaatttggaagtgaagtttgggaacgtgttttggttcaagcttttgag
ttattgacagattccaatgatgagccccttgtagcagccatcagttttgtctttaaagct
gcatctcaatgccagcatcttccacaagctgccagagctgtccgctcaaggctaaaaagt
ctgggtactgaagtcccacactgtgtgcttgatgttttatctaaaactgtacatgcttgg
gctgacgtggctgaagctatattaagagatattgactctgattgtgagtttgatggaaat
tgcatgccttcaccttgtggtactttctcttgcggagtaaatgggttttcagctgaaggg
atgtatgctggcgaagagcaggttgttcatggatgccatcatctatctgatgtttacata
ttgatagagatgttgtccatgcctgggttgtttgtcgaagtttcacaggtttttgagaga
gctttactgcggggcgctattaggctccaatcagttgccatggtattggaaagacgccat
tctcaaaggttaagcggaaaatctaggtctgttgtggatgattcacagaacaaacaagtt
ctggtagatggacaatttcaaccattgcccattcaggaagatgacttcacatcagttctt
tctcttggtgaggtattatccctctctagggataccagagtgcaggactttgtgaggatg
ctatatgctatcatgtttaaaatttatgtcgaggaccattacagatacaggatactgaag
gggcttgttgaacgggcaacaaatacttcagagagttgtcgagtagttgatatagatatg
gatgttttggtattccttgttagagaagaagaaggaattgctagaccagtcctgaacatg
atgcgggaggttgctgaagttgctcaggttgaccgtgcaaatctatggcaccaaatatgt
gctattgaggatgaaaatatgcgttttcgggaggaaaaagaggaagagatatccaacctt
acccgtgaaaaagctgctttatcacaaagactaagtgaatcggaggcgtccaccagccat
cttaagtctgaattgaagtctgaaactgaccgttttggtcgggaaaagagagaactctct
gatcagatacttgaggttgagaatcagatggaatggttaagatcagaaaaggatgagcaa
attgcaaagatctctgccgacaagaaggttcttcaggaccgtcttcatgaagcagaggca
caactttcacagttgaaatcacggaaaagggacgaactaaagttgatgcagagagtggtg
aaggagaagaatgcactggctgagaggcttaagaatgctgaagctgcacgaaaaagattt
gacgaggaactgaaacgctatgccacagagacagtgactcgggaggaagtaaggcaatcg
cttgaagatgaagtacggaggctcacacagacagttggacaaaccgaaggagaaaaacga
gagaaggaagaacaagttgctcgctgtgaagcatatattgatggaatggaagcaaagtta
caagcttgccagcaatatatccacactcttgaagcttcgctccaagaagaaatgtcccgt
catgcccccctttatggtgtaggcgtggaagctttgtcaatgaaagagctcgagacactc
acacgcattcatgaggacggacttagacaaatccatgcgattcagcaaagaaaaggtagc
agcaattcccttgtgagcgggcactccctcccacaggtccatggcctattcccagcagct
cctccagtggcagttggtctgccgtcctcgataattcccaatggtgtaggaattcaaggc
aatgggcatatgaacggagcggttggtcctccatggtttaacccaacctag
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