KEGG   Typha angustifolia (narrow-leaf cattail): 140773213
Entry
140773213         CDS       T11061                                 
Name
(RefSeq) DNA repair protein REV1 isoform X1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    140773213
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tang03400]
    140773213
DNA repair and recombination proteins [BR:tang03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    140773213
SSDB
Motif
Pfam: IMS IMS_HHH_1 IMS_C BRCT BRCT_2 PTCB-BRCT POLH-Rev1_HhH IMS_HHH LIG3_BRCT DUF1805
Other DBs
NCBI-GeneID: 140773213
NCBI-ProteinID: XP_072971770
LinkDB
Position
13:join(7358828..7358982,7359062..7359322,7359401..7359477,7363521..7363981,7366628..7366771,7366979..7367111,7367194..7367282,7367381..7367431,7367547..7367750,7374864..7374983,7381135..7381227,7386529..7386588,7386690..7386776,7386909..7386992,7387335..7387407,7388342..7388410,7396007..7396120,7396315..7396781,7398446..7398535,7398612..7399189,7405954..7406014,7408031..7408081)
AA seq 1173 aa
MSFSSRNSHSAGSSSSGDFRKRGRPNSNSNSRSRNPRNILRSKNSPFTDFGSYMAEKNRK
LRDQFETDASTSSTGPGDDGKGIFDGVSIFVDGFTIPSSQELKGYMLKHGGRFVNYFSRH
TVTHIICNNLPDSKMKNLRAFSRGLPVVKPAWVVDSVAASRLLSWVPYGLSEYVNETCKQ
QKLYSFFYQKSNPSLGHVEMAVTPDPDSDNEGSFSTDKASRQSVSSEQSQKITYEGESSE
EFACFEDRSTDQRKTTASKDTDSQDEQNVLDASESSCRSIHSISNPNSKEALDIKSTKDS
NQGHSTLTDPNFVENYFKNSRLHFIGTWRNRYRKRFSNILGEAKNNSSDSDPRTDRKKVT
IIHIDMDCFFVSVIVRNFPELLDKPVAVCHSDNPKGTAEISSANYPARDYGVKAGMFVRD
AKSRCPHLVIFPYDFEAYEEVADQFYTVLHKHCNRVQALSCDEAFLDITGHSNDDPEHLA
LMIREEITQTTRCTASAGIAENLLLARLATRSAKPNGQCFIPSEKVHDYLSNLPIKALPG
IGHTLAEKLKYRQVQTCGQLRMISKEALHNDFGKKIGDMLWNYCRGIDHRLVEVVQEAKS
VGAEVNWGVRFNNSSDSENFLMNLCKEVSLRLQGCGVQGHTITLKVKKRRKGAEEPVKYM
GCGDCETVSRSVTIPVATDDVMSLQRIAKQIFVSFHIDVKEVRGVGLKVSRLESVGTTRK
GLEENLLEAWLASPSSKSKEAHKDIASSSKQNDSGDAGDILLADWRLHRADSDNQQNDRK
STISCNNEISCPANANLGNSCADADSISQLPPLGHLDLEVVKNLPPEIISEINAMYKGEL
HGFMEMHQEEKGRINSCKSAISLPEKNVKHPAPVYPEKGYDTKEHIINESIDRKRGKYSV
GSVVPLAEQTTESKVVCPEENVPGNCNGTNAYTQYECANPGNSEFMERTPYLIKAAFASS
SRSDCSTSKSRNADEQIGLMPSSLSQADISVLQQLPHDVRADVLGLVPPHRKKDFIGNAL
RCTSARKFLKAEGSETAEYSRTFLLSGSPPNWVEKFRTSNCMILNIFAELYAKCRGDDLL
SSIFQSMVSFLPLTPVPDTEEWDEALSYFSELLTQYTNLKIESDIEELYNCFCLLKRYSA
VSKLFLQIHDIMLPFLQASIDGHYSGNLHLPVF
NT seq 3522 nt   +upstreamnt  +downstreamnt
atgagcttctcatcccgaaactctcactctgccggttcttcctcttcgggcgacttccgg
aagaggggaagacctaactctaactccaactccagatcgagaaacccccgcaacattctt
cgctctaagaattccccctttaccgatttcggaagttacatggcggagaagaaccggaag
ctgcgggaccagttcgagaccgacgcctccacttcatccacaggccccggcgatgacgga
aagggcatcttcgatggggtttctattttcgttgatgggtttacaatcccctcaagtcag
gagctcaaggggtatatgctgaagcatgggggaaggttcgtgaactacttttcaaggcat
actgtgacccatatcatctgcaacaatcttcctgatagcaagatgaagaatttgagggcg
ttcagcagggggctcccagttgtcaaaccagcatgggtggttgattctgtggcagctagt
aggcttttgagctgggttccttacgggctaagcgagtatgtgaatgaaacctgtaaacaa
caaaagctttattctttcttttatcaaaagagcaatccaagtttgggccatgttgagatg
gctgtcactccagatccagacagtgacaatgaaggctccttctccactgataaagcatcc
agacaatcagtgtcatcagaacagtcccagaaaatcacatatgaaggggaaagttctgaa
gaatttgcatgttttgaagatcgaagtactgatcaacgaaaaactacagcgtcaaaagat
actgattcccaggatgagcaaaatgttctagatgcctctgagtccagctgtaggtctata
catagtattagtaatcctaattctaaggaagctttggatataaaaagcacaaaggattcc
aatcagggacactcaactctcacagatccaaattttgtcgagaactatttcaagaattct
aggctgcattttattggaacttggaggaatcgatatcgtaaacgtttttccaatatattg
ggtgaagccaaaaacaacagttcagattctgatcctcgcactgacaggaagaaagtcact
attatccatatagacatggactgcttttttgtgtctgtcattgtcagaaatttccctgaa
ttgcttgataagccagtagctgtatgccattctgacaatccaaaagggactgcagaaata
tcatctgcaaactatcctgcacgagattatggagtgaaggctgggatgtttgtgagggat
gccaagagtcgctgccctcacttagtcatcttcccttatgactttgaggcgtatgaggag
gtagctgatcagttttacactgtattgcataaacattgcaacagagttcaggcattgagc
tgtgatgaagcttttctggatataactggacatagcaatgatgatcctgagcatctggct
ttgatgattagggaggagataacacagacaactagatgtactgctagtgcagggattgct
gagaatttgctccttgctcgtcttgcaactagatcagctaaaccaaatggtcaatgcttc
attccgtctgagaaggtgcatgactatttgagtaatcttccaatcaaggcacttcctggc
attgggcataccctagcagaaaaactgaaatataggcaagtccaaacttgtggtcagctg
cgcatgatttcaaaggaagctctccacaatgactttgggaaaaagatcggtgatatgtta
tggaattattgccgaggaattgatcatcgactagttgaagtcgtgcaggaagcaaaatct
gttggtgcagaagtgaactggggagttaggtttaataacagcagtgattctgagaacttt
cttatgaacctctgcaaggaggtctcattacgcttgcaaggatgtggagtacaaggtcac
acaataacacttaaggtgaagaagagaaggaaaggggctgaagagccagtgaagtatatg
ggatgtggtgactgtgaaactgtgagccgctcagtgacgattcctgttgccactgatgat
gtgatgtctctacagcgaatagcaaaacaaatttttgtatcttttcatatagatgtcaag
gaagtccgtggtgttggattaaaagtatcacggcttgaaagtgtaggtacaacgcgaaaa
ggacttgaagaaaatctacttgaagcatggcttgcttctccatcttcgaagagcaaggag
gcgcataaggatattgccagttcatctaaacagaatgatagtggagatgctggagatatc
ttattggctgattggagactacaccgtgcagactctgacaatcaacaaaatgataggaag
tctacaatatcatgtaacaatgagatatcttgtccagcaaatgccaatctgggaaattct
tgtgctgatgcagatagcatttcacagttgccaccattaggccatcttgatttagaagtt
gtcaagaaccttcctcctgagataatatcagagataaatgctatgtacaagggagagtta
catggttttatggagatgcatcaagaagaaaaaggaagaataaattcttgcaaatctgca
atatctttacctgaaaaaaatgtgaaacatccggcaccggtttatccagaaaaaggctac
gatactaaagagcacattattaatgaatccattgatagaaaaagaggcaaatattctgta
ggttccgttgtccccttggctgaacaaactactgagagtaaggttgtctgtccagaggaa
aatgtgcctggcaattgcaacggtacaaatgcatatacgcaatatgaatgtgccaatcca
ggaaacagtgagtttatggagagaacaccttatttaattaaagcagcatttgcttcttcc
tcgagatccgattgttcgaccagtaaatcaagaaatgccgatgagcagattggtttaatg
cctagttctctaagtcaggcagatatttctgttctgcaacaattacctcatgatgtgagg
gctgacgtacttggattagttcctccacacagaaagaaagattttattggtaatgccttg
aggtgtacttctgcaagaaaattcctcaaggctgaaggaagcgaaaccgcagaatattct
cgaacttttcttttgtcaggaagtcctccaaactgggttgagaagttcagaactagcaat
tgtatgattttgaacatttttgcagaactgtatgctaaatgcaggggtgatgatctacta
tcctccatttttcaatctatggtctcttttcttcccttaactcctgtacctgacactgaa
gaatgggatgaagctctttcatacttctctgagcttcttacacagtataccaatctaaag
atcgaatcggacatcgaggagctctacaattgcttttgccttttgaaaaggtattctgca
gtatcgaaattattccttcaaatacacgacattatgcttccttttctacaggcatccatc
gatgggcattacagtggaaatttacatcttccagttttctag

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