Typha angustifolia (narrow-leaf cattail): 140773329
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Entry
140773329 CDS
T11061
Name
(RefSeq) eukaryotic translation initiation factor-like
KO
K03260
translation initiation factor 4G
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tang03019
]
140773329
03012 Translation factors [BR:
tang03012
]
140773329
Messenger RNA biogenesis [BR:
tang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
140773329
mRNA cycle factors
Stress granule specific factors
140773329
Translation factors [BR:
tang03012
]
Eukaryotic type
Initiation factors
eIF-4
140773329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
140773329
NCBI-ProteinID:
XP_072971921
LinkDB
All DBs
Position
13:complement(join(12413074..12414114,12414447..12414689,12414781..12415131,12415225..12415312,12415676..12415773,12417650..12417835,12418142..12418237,12418949..12419020,12420166..12420312))
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AA seq
773 aa
AA seq
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MQSDQMVISLRPGGGGNRGGRLLAPRFDSAAGSPAELPFLRHHGGAAAKIGDSRFEAREP
IRYTRDQLLQFREVVDIAETILKLKQEFEAELHGEDQAWGRTDSNLQNQSHARYSEPDNR
DWRGRSGQSSVGEEKSWDSKESYGSNPRQQDQLSSQFSSRVQVSAGQVGSTPALIKAEIP
WSVQRGNLSEKERVLKTVKGILNKLTPEKFDVLKGQLIDAGIITPDILKGVITLIFEKAV
FEPTFCPMYAQLCYDLNEGLKPFPAEEPGGKEITFKRILLNNCQEAFEGADNLRAEVRKL
TGPDQEIERRDKERLVKLRTLGNIRLIGELLKQKMVPEKLVHHIVQELLGHDGKTCPAEE
NVEAICQFFSTIGKQLDGSTKSRRFNDAYFNRLKELTINPQLAPRLRFMVRGVLDLRAND
WVPRREEIKAKTITEIHTEAEKNLGLRPGATASMRNGRSASAVGPLSPGPFSMNRPGAGG
MMPGMPGTRKMPGMPGLDADNWEVPRSKSMSRGDTFRNQSSMVGKVSPTNSKLLPQGSRG
SVSGKTSALLQSGVSGMAARPSVLSGTVDSPAQNFAQLKPTGGASITPPVTEITEKASSA
PKMSPDELYKKTVALLEEYFHVRILDEALQCVEELKSPDYYPEVVSEAINLALDKGSSCI
DPLVRLLQFLFMKNILKPRDLGTGCLLYGSKLDDIGIDLPKAPYYFGEVVGKLILTAGLS
FKVVEDVLKRMEDVKFQSTFFDAVIRSIEEHPSGRAILGMQAAEISSCKNILS
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcggatcagatggtgattagcttgaggcctggaggtggaggcaatcgaggcggt
agactcctcgccccgcgcttcgactccgccgctgggtcgccggccgagctcccgttcctt
cgccaccatggcggtgcagccgccaagattggagattcacgctttgaggctcgtgagcca
atccgttatacaagggatcagctattacagttccgtgaggttgttgatatagctgaaact
attttgaaactcaagcaagagtttgaggcggaacttcatggtgaagatcaagcatggggt
cgcactgattcaaatctgcaaaatcaatcacatgctcgttattccgaaccagacaatcgt
gattggcgtggccgatcaggacagtcatcagttggagaagagaaatcttgggattctaaa
gaatcatatggatccaatccaaggcagcaagaccagttgagctcccaattttcttcaaga
gttcaagtttctgcaggccaggtgggaagtactcctgctctaattaaggctgaaattcca
tggtctgtccaaagaggcaatctttctgagaaagaaagggtgctgaaaacagtaaaaggt
atattaaacaaattgacaccagagaaatttgatgttctcaagggtcaactgattgatgca
ggaatcattacacctgatatcttgaagggggtcatcactctcatattcgagaaagcagtt
tttgagcctacattttgtcccatgtatgctcaactgtgttatgatctaaatgaaggactc
aaaccattccctgctgaagaacctggtggaaaagagataacgttcaagcgtatactctta
aataattgtcaggaggcatttgaaggtgccgacaatctgagggctgaggttcgaaagttg
actggtccagaccaagaaattgaacggagggataaagagagactagtgaaactacgaacg
cttggaaatattcgcctaattggggaattactaaagcaaaagatggtaccggagaagtta
gttcatcacattgttcaggagctactgggacatgatggcaagacttgtcctgctgaggaa
aatgttgaggcaatctgtcagtttttcagtactattggtaagcagttggatggaagcacc
aagtctcgtcgattcaatgatgcctactttaaccggctgaaggagctgacaataaacccc
cagttggcaccacgcttgaggttcatggtccgtggtgtccttgacctgcgtgccaacgac
tgggtccctcgacgtgaagagatcaaggccaagactatcactgaaattcacacagaagca
gaaaagaatcttggattgagaccaggtgcaactgcaagcatgaggaatggacgcagtgca
agtgctgtggggcccctctctcctggacctttttctatgaatcggcctggagctggaggt
atgatgccaggaatgccagggacaagaaaaatgcctggaatgccagggttggatgctgat
aactgggaagttccgcgttcgaaatccatgtcaagaggtgacacatttcgcaaccagagt
tctatggttggtaaggtatcacctactaattccaagctacttcctcaaggtagcagagga
tcagtaagtggaaagaccagcgcactgttgcagagtggtgttagcgggatggcagctcgt
cctagtgttctttcaggtacagttgactcaccagctcaaaattttgcgcaactgaaacca
actggtggtgcatcaattacacccccagtcactgagataactgagaaggcatcatctgct
ccaaaaatgagccctgatgaactatataagaaaactgttgctcttttagaggagtatttt
catgtccgtatacttgacgaagcattgcaatgtgttgaggagttgaagagccctgattac
taccctgaagttgttagtgaagcaatcaatcttgcccttgacaaaggctcaagttgcatt
gatcctcttgtgaggcttttgcagtttctgtttatgaagaacattctcaagccaagagac
ttgggaactggatgcttgctttatggttcaaagctggatgacattggtattgacttgcca
aaggcaccatattattttggtgaagttgttggaaaattgattttgaccgctggcttgagc
ttcaaagtagtggaagatgttttaaagagaatggaggatgtcaagttccaatcaacattt
tttgatgctgtgattagaagcattgaagaacatccatctggtcgagctatattaggcatg
caggcagctgagatcagctcttgcaagaatatactctcctga
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