Typha angustifolia (narrow-leaf cattail): 140773369
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Entry
140773369 CDS
T11061
Name
(RefSeq) SNW/SKI-interacting protein A
KO
K06063
SNW domain-containing protein 1
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140773369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tang03041
]
140773369
Spliceosome [BR:
tang03041
]
Complex B
Other components
Prp19-related factors
140773369
Complex C
140773369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
140773369
NCBI-ProteinID:
XP_072971983
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All DBs
Position
13:2055795..2057588
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AA seq
597 aa
AA seq
DB search
MAALKDLLPPAKSTSSSFYDHSTDPWFKERYGSSTDSAPSAVIKTKPIPPYGKRSGFIPR
RPEDFGDGGAFPEIHVGQYPLGMGRRDEKSGSKILPLTVDSHGNVAFDAIVKQNENASKI
VYSQHKDLVPKIAIEEQTESEEYEKQIEETTERTKAALEKIVNVRLSAAQPKNVPTHDSE
SKFIKYKPSQQSAAFNSGAKERIIRMVEMPVDPLEPPKFKHKRVPKASGSPPVPIMHSPP
RPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSEALYVA
EQKAREAVAMRSKVQKELMLKEKDRKEQELRALAQKARSERTGIAPAPAAAAVTADKSLI
DDGDMRPEPHEQHKETREEREERLQRDKIREERRRERERERRLEAKDAAMGKKSKITRDR
DRDISEKVALGMANTGAGRSGEVMYDQRLFNQDKGMESGFAADDQYNIYDKGLFTAQPTL
STLYRPKKDADADMYGGADEQLEKVLKTDRFKPDKAFSGVSERASGSKRDRPVEFDKQEE
NDPFGLDQFLTEVKKGKKAVEKIGGGGTMKASAGSSMRDDYEGGGSGRSRIAFERGR
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccttaaggaccttctgccgccggcgaagtctacctcctcatctttttacgat
cactcgacggacccatggttcaaggagaggtatggctcttcgacggattctgctccttct
gctgtgatcaagacgaagcccatccctccctatgggaaacgctctggtttcatccctcgg
aggcctgaggattttggcgatgggggtgcgttccctgagatccatgttggccagtacccg
cttggtatgggccgcagggatgagaagagtggatccaagatccttcctctcactgtggat
tcacatggaaatgttgctttcgatgctattgtgaagcagaatgaaaatgcttccaagatt
gtgtattcgcagcataaggaccttgtcccaaaaattgcaattgaggagcagactgaatca
gaggaatatgagaagcagattgaggagacaacagagaggacaaaagctgctttagagaaa
attgtcaatgttaggttgagtgctgcgcagccaaagaatgtcccgacacatgactccgag
tcgaagtttataaagtacaagccatcacagcagtctgctgcattcaattccggagcgaag
gagaggatcatccgcatggtggagatgcctgtagaccccctagagccaccaaagttcaag
cacaagagggttccaaaagcatcagggtcaccaccagtgccaatcatgcattccccacca
cgccctgtcactgtgaaggaccaacaggactggaagatcccaccttgcatatctaattgg
aaaaatccaaaagggtacacaatcccgttggacaagcgtctggctgctgatggaaggggc
cttcaggatgtacagatcaatgataactttgcaaagctctctgaagctctgtacgtggcg
gagcagaaggcaagagaagcggttgcgatgaggtcaaaggtacagaaggaattgatgttg
aaggagaaagacaggaaggagcaggagcttcgtgcgctggcacagaaggcacgttcagag
aggactgggattgctcctgctcctgctgctgctgctgttactgctgacaagagtttgatt
gatgatggtgatatgaggcctgagccccatgaacagcataaggagacgagggaggaaagg
gaggagaggctgcaacgtgataaaattcgtgaagagcgtaggcgtgagagggagagggag
aggagattggaagcgaaggatgctgcaatgggtaagaagagtaaaattactagggatagg
gatcgtgacatcagtgagaaggttgctcttggcatggcaaataccggagcaggtcgctct
ggggaggtcatgtatgaccagaggctctttaatcaagataagggaatggagtctggattt
gcagctgatgaccagtacaacatatatgataagggccttttcacagcacaacctacactt
tctacgctatacaggcctaagaaggatgctgatgctgatatgtatggaggtgctgatgag
cagctggagaaggtcctaaagacagataggtttaagcctgacaaggcattctctggtgtt
tcagagagagcatctggtagcaagagagacaggccagttgagtttgataagcaggaagag
aatgatcccttcggtttggatcagttcttgactgaggtgaagaagggtaagaaggcagtg
gagaagattggtggtggaggaactatgaaagcaagtgctggttcttcgatgagagatgac
tatgagggtggaggatctggaaggagtcgtatagcctttgaaagagggcgatga
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