Typha angustifolia (narrow-leaf cattail): 140773499
Help
Entry
140773499 CDS
T11061
Name
(RefSeq) uncharacterized protein isoform X1
KO
K20308
trafficking protein particle complex subunit 11
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140773499
Membrane trafficking [BR:
tang04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
140773499
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Foie-gras_1
Gryzun-like
Gryzun
Novirhabdo_Nv
TRAPPC13_C
Motif
Other DBs
NCBI-GeneID:
140773499
NCBI-ProteinID:
XP_072972196
LinkDB
All DBs
Position
13:complement(join(3308893..3310343,3310641..3311488,3311573..3311739,3311855..3312196,3312316..3312396,3313259..3313382,3313601..3313715,3313984..3314045,3314893..3315233))
Genome browser
AA seq
1176 aa
AA seq
DB search
MEDYPEELRTPPVSLVSVVGCPELHQTISAFLHSEQPPINTLALPDFSKISILARKQKDP
LASSSPAAGILKRDWLLKHRTRVPAVVAAFFRSDHVSGDPAQWLQVCTDLENLKSVLYGR
STKLVVVLVQSQFSDELSEDLMIALRKRAEIDSKYLVVLTENDESELRQSLSRLASIFAE
LCMTYYKEEGRKIRSRIEKKGFASVELNIRYCFKVAIYAEFRRDWVEALKFYEDGFRALL
ETIRTSTRLPPIQHLVEIKSVAEQLHFKISTLFLHGGKIVEAIAWFHKHIRSYEQLVGEP
LVAFLHWEWFSRQFLVFAELLETSSAAIPSTLSSHFGTSDNPLTEWEFQPAYYYQLAANY
LREKRDCLDLALSTKERANKIGSIPESVIPSIYVGQFARLFEQGDTVAVLHLSDEEYMSY
ALAEAERFQDSYEIIALYKKSCELFNSHSASRMACFCNSRMAKEYYVAEDFSTAKKLFDD
VAALYRQEGWATLLWESLGYLQECSRKLGSAKDFIENSLEMSALPILSGNDILGASDSKN
AYGPAGPPILSRRESIQEEVFDLIKRENKLEAADSGSNLHLTEDQLVCLDIDLISPMRMV
LLASVAFHDQTVRPGSPALITVSLLSQLPCPFEIDLLEVQFNQPMCNFKIINSQEDLSTL
KSIVDDQGAQLESAPSLTLSTNKWLRLTFAIRSGQSGKLDCLSVTAKIGNYFMICCRAES
PAAMEDLPLWKFEDRLETSPMKDPGLSFLGQKFIQVEEPEPQVDLVLTSSGPALVGEIFI
VPVTVLSTGHAVHSGELKINLVDARGGGLLMSPREAEQFDSHHVELLSISGLPEEEPQTD
LDNIRKIQYSFGVVSVPVIEIGKSWSCRLEIKWHRPKSVMLYVSLGYSPSSTEATQRVNV
HRSLQIEGKIPINISHRFMIPFRREPLLLSKVKSLPHDQMEPLAFNETSILIVGARNCTE
VPLRLISISIKQEDESDDRNFCSVRQIGGISAKHALLAPGEEYKGAFSVTPQVDYPILGI
GTICLSWLRDSSLGGEHDSGALTKHKLPDVHVEKPPLVVSIECPPHAILGVPFSFYVKIR
NSTCLLQEIKYAIDDSQSFVFSGPHDDAAFILPKTEHLISYKLVPLSSGSQQLPRITITS
MRYSAALSPSIAAATVFVYPTERKFTAEGSKSETIA
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggaggactaccccgaggagctccggaccccgccggtctccctcgtgtccgtcgtcgga
tgcccggagctccaccagacgatctccgccttcctccactccgaacagccgccgattaac
actctggctctgccggacttctccaagatctcaattctcgcgaggaagcagaaggatccc
ttggcttcctcttcgccggcggccgggatcttgaagagggactggctcttgaagcaccgg
actagggttccggccgtcgttgctgccttctttaggtcggatcacgtcagcggcgatccc
gcgcagtggctacaggtctgcaccgatcttgagaacctaaaatctgtgctgtatggtaga
agcaccaaattagtggtcgtccttgtgcaatctcaatttagcgatgaactgagtgaagac
ctaatgattgctttgagaaaacgtgcagagatagattcgaagtaccttgttgtgttaact
gaaaatgatgaatccgaattaaggcaatcactcagcagattggctagcatatttgcagaa
ttgtgtatgacatattataaagaggaagggcgaaagataagatcccgcatcgagaagaag
ggctttgcttctgttgaattgaatatccgctactgctttaaggtggccatttacgcggag
tttagaagggattgggtagaagcattgaagttctatgaggatgggtttcgtgctttgctt
gagacaatcagaacatcaacgagattgccaccaatccaacacctggttgagataaaatct
gtggccgagcaactgcactttaaaatatccacattgtttcttcatggtggaaaaatagta
gaagcaattgcctggttccataaacacattagaagctatgaacagctagttggtgaacct
ctagttgcttttcttcactgggaatggttcagtaggcaattcctggtttttgcggaatta
ctagagacaagctcagcagctattccgagcacactttcttctcattttggcacatcggat
aaccctctgactgagtgggaatttcaaccagcttactactatcagttagcagcgaattac
ttgagagagaagagagactgcttagatcttgcattgtcaacaaaggagcgagcaaataaa
attggcagcattccagagtctgtaattccctctatatatgttggtcaatttgctcgcttg
tttgagcagggtgatacggtcgcagtgcttcatctttcagatgaagaatacatgagctat
gctcttgcagaagcagaaagatttcaagattcatatgagatcattgccttatataaaaaa
tcttgtgaattattcaacagccacagcgcatcaaggatggcttgtttctgcaacagtaga
atggctaaagagtattatgtggctgaggattttagtactgcaaagaagctctttgatgat
gttgctgctctatatcgtcaagaggggtgggctactttgctttgggaaagcttgggttat
ttacaagagtgctcaaggaaacttggttctgcgaaagatttcatagaaaattctcttgaa
atgtcggcattgcctattttatctggtaatgatatactgggagcctcagatagtaaaaat
gcgtatgggcctgctggtccgcctatcctttctagaagagagtcaatacaagaggaagtt
tttgacctaataaagagagaaaataagctagaagcagctgatagtggttcaaatctccat
ttgacagaagaccagcttgtttgtcttgatattgatctgataagtcccatgaggatggta
cttcttgcatctgtggcatttcatgatcaaactgtcaggccaggctcacctgcactgatc
actgtatcacttctgtcacagctaccctgtccatttgagattgatctgttggaagtccag
ttcaaccagcctatgtgtaatttcaaaattatcaattcccaggaagatctttccacattg
aagtctattgtggatgatcaaggtgcgcagctagagagtgctccatcactgacattgtca
actaacaagtggctgcggttgacatttgcaattagatcaggacagagtggaaagcttgac
tgcttgtcagtgactgctaaaataggaaattatttcatgatctgttgccgagctgaaagc
cctgctgctatggaagatctgccactatggaaatttgaggatcggctggaaacctctcca
atgaaagaccctggactttcctttttggggcagaagtttatccaggttgaagagccagag
cctcaagttgatctcgtcctaacttcttctggccccgcattagttggagaaatcttcatt
gttcctgtcacagtattgtcaacaggtcatgccgtccattctggtgaactgaagattaat
cttgtggatgcaagaggaggaggcctactaatgagtccaagggaagcagagcagtttgac
agtcatcatgttgagcttcttagcatttcagggttaccagaggaagaaccacaaactgat
ctcgacaacattaggaaaattcaatattcctttggagttgtctctgttccagtaattgaa
ataggtaaatcatggtcttgcagattagaaatcaaatggcacagaccgaagtctgtcatg
ctatatgtttcacttggttactcaccaagttccactgaggctacgcaaagagttaatgta
cacaggagcttgcaaattgaagggaagatccctattaacattagccaccgatttatgatt
ccttttcggcgagaacccctgctactctctaaggtgaaatcactgccacatgatcaaatg
gagcctcttgctttcaatgaaacaagcatcctcatagtgggtgctagaaattgcactgag
gtgcctttgcgattaatatcaatatctatcaaacaagaggatgagtcagatgacaggaat
ttctgctctgtgcgacagattggagggatttctgctaaacatgcccttctggctcctggt
gaagaatataaaggggctttctcggtcacaccacaggttgattatcctattcttgggata
ggcacaatttgtctgagctggctgagagattcaagtcttggtggagagcatgactctggt
gctctgacaaaacataagttgcctgatgtacatgttgagaagccaccgctagttgtgagt
attgagtgccctccacatgctattcttggtgtccctttctcattctatgtaaagatccga
aactcaacatgcttgcttcaggaaatcaagtatgccatcgatgactctcaaagttttgtg
ttttctgggccacatgatgatgctgcttttattctgccaaaaactgagcatcttattagt
tacaagcttgttccattgagttcagggtcccaacagttgccaaggatcaccataacttca
atgagatactcagctgcattgagcccctccattgcagctgcaacagtctttgtatatcct
actgagcgtaaatttacagcagaagggagcaaatcagaaaccattgcctga
DBGET
integrated database retrieval system
