Typha angustifolia (narrow-leaf cattail): 140773528
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Entry
140773528 CDS
T11061
Name
(RefSeq) two-component response regulator ORR21-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
140773528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tang03000
]
140773528
Transcription factors [BR:
tang03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
140773528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
140773528
NCBI-ProteinID:
XP_072972235
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All DBs
Position
13:join(17549569..17549731,17550632..17550784,17550863..17551261,17551446..17551522,17551949..17553283)
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AA seq
708 aa
AA seq
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MTVSAMSGASCYVSAKVEDEGSSEFPVGLKVLVVDDDMTCLMVLKRMLLECRYDVTTCSQ
ATRALTLLRESKGSFDVVISDVHMPDMDGFRLLELVGLEMDLPVIMMSADTRTNVVMKGI
KHGACDYLIKPVRMEELKNIWQHVVRKKWNDNKELEYSGSLEESDRNRRVTDDTDYASSV
NDGADGAWKSHKKKRDPKEEDDGELDNGDPSSSKKPRVVWSVELHQQFVNAVNQLGIDKA
VPKRILELMNVPGLTRENVASHLQKFRLYLKRLSGAAQNHSGLSGSLCGPASNVEVGSLG
RLDFQALVASGRIPPETLAALQDELLSQPSGSLVMPAMDQLQGTKFVPIEREIAFGQPLS
KCQTDLYRQLPQSSIAMEEIPTFPTFSHSNVSVTDSTSNLLGLSNCRNDNMAVQVLQQQQ
SIPWESESLKSSNVKPSCPVGEHPMFMNQKPLAVSAQSSTSYQPAIPSTSTDQDSVLVPS
QSLTSLQTGNHSGLMNQNSIIAPIESLACFQGGNILRSMNQNSKVTRFPTLARFQVGRNP
SENNASSLRFGSSYNSGNAVVGSSLLSSQSKNIQLGVGQIIDESSRNISVGNSYSVSWLA
SSSGSSCIDGGIGSSLQTLDGNVIRANGSHSLVPNSCDIQGSTAALGILHDQGQGRNLGF
VGKGICIPSRFAVDEIESPPKNLSYSNTCIANGGNIVNADIFGFNGQL
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgacagtctcagctatgagtggggcgagttgctacgtctcggcgaaggtggaggatgag
gggtcgagcgagttcccggtcggattgaaggttcttgtggtggatgatgacatgacctgc
ttgatggtgttgaagcggatgcttcttgagtgccgttatgatgtcactacttgctctcag
gctacaagagcactaactcttctccgggagagcaagggcagttttgatgttgtaataagt
gatgttcacatgcctgatatggatggatttaggctacttgaacttgttggccttgaaatg
gatcttcctgttatcatgatgtctgctgatacaagaaccaatgttgtgatgaaaggaatt
aaacatggggcttgtgactatttaatcaaacctgtacggatggaagagttgaaaaacata
tggcaacatgttgttaggaaaaagtggaatgataataaagagcttgaatattcaggcagc
ttggaagaatctgaccggaatagacgagtcactgatgatactgattatgcttcatctgtt
aatgatggagccgatggcgcctggaaatctcacaaaaagaaaagagatcctaaagaagaa
gatgatggtgaactggataacggagatccttcttcatcaaagaaaccacgagtagtatgg
tcagttgagcttcatcagcagttcgtcaatgcagtgaatcaacttggaattgacaaagct
gtcccaaaaagaattcttgaattgatgaatgttccgggtttaaccagggaaaatgttgct
agtcatttgcagaaattcagattatatctcaagagattaagtggagcagctcagaaccat
agtggactttctggttccctatgtgggcctgcctcaaatgtggaagtgggatcactagga
agacttgatttccaagctctggttgcctcaggtcgtattcctccagaaaccctggctgcc
ttgcaagatgagctcctaagtcaaccctctggcagcttagtaatgcctgcaatggaccaa
ctccaaggtactaagtttgttcctatagagagagaaatagcatttggccagccactatcg
aaatgccagactgacctatacagacaacttcctcaatccagtatagctatggaggaaatt
cctacttttccaactttttcccatagtaacgtctctgtgacagactctaccagcaacctt
cttgggctaagtaactgtagaaatgacaacatggcggtgcaagtgttgcagcagcaacag
tcaattccctgggaatcagaatctctcaagtcatcaaatgtgaaaccttcttgcccggta
ggtgagcatcctatgttcatgaatcagaaacccttggcagtttccgctcagtcatcaacc
agttatcaaccagcgattccttctacttccacggatcaggattctgttcttgtcccatct
caatcattaaccagtttgcagactgggaatcattctggtctcatgaatcaaaattccata
attgctcccattgagtcattagcatgttttcaaggagggaatattctcagatccatgaat
cagaactctaaagtaactcgttttccaacattggctagatttcaggtagggaggaatcca
tcagagaacaatgcttcctctctcagatttggttctagctataatagtggcaatgctgtt
gtgggttcctccttactttcttctcaatctaaaaatattcagcttggtgtgggacaaatt
atagatgaaagttctaggaatatctctgtaggaaacagctactcagtttcttggctggca
tcttcatcaggttcatcctgtattgatggtggaattggttcatcgctacagacccttgat
gggaatgttattcgtgcgaatggatcacatagtcttgttcctaactcatgcgacattcag
ggctccactgcagcattgggtatattacatgatcaaggacaagggagaaatcttggtttt
gttggtaaaggcatttgcattcccagccgcttcgccgtggatgaaattgaatcgccacct
aagaacttgagttatagtaacacatgcatcgccaatggtggaaacatagtgaatgcagat
atttttggatttaatggacagctataa
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