Typha angustifolia (narrow-leaf cattail): 140773591
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Entry
140773591 CDS
T11061
Name
(RefSeq) KH domain-containing protein At4g18375
KO
K21444
poly(rC)-binding protein 3/4
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tang03019
]
140773591
Messenger RNA biogenesis [BR:
tang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
140773591
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_5
Motif
Other DBs
NCBI-GeneID:
140773591
NCBI-ProteinID:
XP_072972325
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All DBs
Position
13:join(12194546..12195121,12195657..12196157,12196249..12196488,12196577..12196858,12196996..12197051,12197253..12197343,12198994..12199125)
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AA seq
625 aa
AA seq
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MGETGKRSRQQRGDDHEGRNQNKRPVNKDSFGDGELVVYRILCPNGVIGSVIGKSGKVIN
SIRQETRAKIKVVDPYPGSDKRVITIYCYVKDKDHVYDHEDVTEPLCAAQDALLKVHDAI
VNALANTSDSDMNNKEEANILVPASQAANIIGKSGATIKRLRMKTKANIKVNPKDSNEAT
HSCAMSFDNFVQITGDSEAVRRALLSVSAIMYKFSPKEEISLETSVPEVPTSIIIPSDVP
IYPAGSFYHSADAIVPPPSSGLPLIGATPHIPEFPGFSDAASAWPVYPSALPVISGFSGP
SQSEELVLRVLCPSDKIGRVIGKGGSTIKSVRQDSGARIDVDDTKDESEECVITVTSPES
TFDVKSAAVEAVLLLQGKINDEDEERASIRLLVPSKVIGCLIGKGGSIINDMRKKTKADI
RISKGEKPKRAGSSDELVEVSGEVGKLRDALAQIVLKLREGVLRDREGSQNVPKDGSQTI
HSIDPLYSSKLSLPAMLPSIPPVAPLSYDQRAEAERGFGIYPGSSLYGHSSLQAGENGYR
SVSSYTSKTYGGLPPYSEMMIPANALAKVMGKGGTNLENIRKISGAHIDIVDSKSSHFER
IAQISGTTEQKQSAENLIKAFIMST
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagactgggaagcgttcaaggcaacagaggggtgacgatcatgaagggagaaat
cagaacaagaggccagtcaacaaggatagttttggtgatggcgagttggttgtttatcgc
atactttgtccaaatggtgttatagggagtgtgattggtaagagtggtaaagtaataaac
tcaattaggcaggagactcgtgctaaaataaaggtcgttgatccttatcctggttcagac
aaaagggttatcaccatatattgttatgttaaggataaagatcatgtatatgatcatgag
gatgtcacagaacctctttgtgctgcccaggatgctctgcttaaggtgcatgatgctata
gttaatgctctggcaaatactagtgattctgatatgaataacaaggaagaagccaatata
ttggtaccagcaagccaagctgcaaatataatcggcaagtctggggccacaataaagaga
ttgagaatgaagactaaagcaaacatcaaagttaacccaaaagattccaatgaagctact
cattcctgtgcaatgagttttgacaactttgttcagataacaggtgattctgaagcagtt
agaagagcattactttctgtatctgccattatgtacaagttttcaccaaaagaagagatc
tcccttgaaacttcagttccagaggttccaacaagtataattatcccttcagatgtccct
atttatccagctggtagcttctaccacagtgctgatgccattgttccccctccaagctct
gggttaccactcataggtgcaacacctcatattccagagtttcctgggttttcagatgct
gctagtgcgtggccagtttatccttctgctcttcctgttatttctgggttcagtggccca
tcacagtcagaggagctagtacttcgcgtcttatgtccatctgacaagattggacgggtt
attggtaaaggcgggagcaccataaagagtgtaaggcaggacagtggtgcacgtattgat
gtcgacgacacaaaggacgagtcagaggagtgtgtaattactgttacatcccctgagtcc
acctttgatgtgaaatctgcagcagttgaagctgttttgctgcttcaaggaaagattaat
gatgaagatgaggaaagagctagtatccgccttcttgtcccatcaaaagttattggctgt
cttattggcaagggtggttcaattataaatgatatgcgcaagaagactaaggctgatatt
cgcatctcaaagggagaaaagcccaagcgtgctggctccagtgatgagcttgtagaggtg
tctggagaggtgggtaagctgcgtgatgcacttgctcagatagttttaaagctcagggaa
ggtgttttgagggacagagagggcagccagaatgttccgaaggatggcagtcagaccata
cattcaatagatcctttatacagcagtaagctttctctgcctgccatgttgcctagtatt
ccaccagtggcccctttgagctatgatcaaagagctgaggctgaaagaggttttggaatt
tatcctggaagcagtttgtatgggcacagttctttgcaggctggagagaatggttataga
tcagtctcatcatatacatcaaagacgtatggaggattgcctccatatagtgaaatgatg
attcctgcgaatgccttggctaaagttatgggaaaaggtggtacaaacttggagaacatt
aggaagatttctggtgctcacatagacattgttgattccaaatcatcccattttgaacgc
attgctcagatttcgggcactactgagcagaagcaatcagcggagaacttaattaaggcc
ttcataatgtcaacataa
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