Typha angustifolia (narrow-leaf cattail): 140773729
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Entry
140773729 CDS
T11061
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP-like isoform X1
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04120
Ubiquitin mediated proteolysis
tang04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
140773729
04120 Ubiquitin mediated proteolysis
140773729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tang03110
]
140773729
04131 Membrane trafficking [BR:
tang04131
]
140773729
04121 Ubiquitin system [BR:
tang04121
]
140773729
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140773729
Chaperones and folding catalysts [BR:
tang03110
]
Other chaperones and cochaperones
Others
140773729
Membrane trafficking [BR:
tang04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
140773729
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
U-box type E3
140773729
Multi subunit type E3
STUB1-CHIC2 complex
140773729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
TPR_1
TPR_2
TPR_11
TPR_17
TPR_16
TPR_8
zf-NOSIP
TPR_12
zf-Nse
Motif
Other DBs
NCBI-GeneID:
140773729
NCBI-ProteinID:
XP_072972539
LinkDB
All DBs
Position
13:complement(join(15520872..15520997,15521085..15521195,15521284..15521407,15521850..15521983,15522567..15522638,15522941..15523018,15525917..15525980,15526075..15526142,15526798..15526908))
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AA seq
295 aa
AA seq
DB search
MAPVPASVAKQAELLKQDGNTFFKKERIGAAIDAYTEAIVLSPNVPVYWTNRALCYKKRN
EWKKVEDDCRMALQLDKFSVKILSNFTILHFAIGATLTCIPPPFCILAHYMLGLALLDRQ
EFAEGIKELEKSLELGRGANPASYMVEEIWQELAKAKYTEWERSSKKRATRLHELEKACE
EALKNYHGLDGSTEDEHEEQLIHLKEVFRKADDIPKEVPDHLCCKITLDIFRDPVITPTG
VTYERSVLLDHLQKVGKFDPITREPLAPHQLVPNLAIKEAVQAFLNKHGWAYRMS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggtgccggcgagtgtcgcgaagcaggcggagcttctcaagcaggacggcaac
accttcttcaagaaagaacggattggggccgccatcgacgcctacaccgaggcgatcgtg
ttgtcccctaatgtaccagtatattggactaaccgagctctctgctataagaagagaaat
gaatggaaaaaagttgaggatgactgcagaatggctcttcagctcgacaagttttctgtc
aagatcttgtcaaacttcactatactacactttgccataggagccactcttacgtgcatc
ccaccacccttctgcattctggcacactatatgttggggcttgcgttgctcgacaggcaa
gaatttgctgagggaatcaaagagctagagaagtctctggaacttgggagaggtgcaaac
cctgcaagctacatggttgaggaaatctggcaggagcttgcgaaggcaaagtacactgaa
tgggaaaggtcatcaaagaaaagagcaactagattgcatgaactggagaaagcatgtgaa
gaagctctgaagaattatcatggacttgatggttcgacagaagatgaacatgaagagcag
ttaattcatcttaaggaggtcttcagaaaggctgacgacattccaaaagaagtgcctgat
catctctgctgcaaaataaccctggacatcttccgggatccggtgattactccaaccgga
gttacatatgaaagatcagtgcttcttgatcatcttcaaaaggtcggcaagtttgaccct
atcacacgggagccgcttgcgccacatcaattggtaccaaaccttgccattaaggaagca
gtccaagcattcctgaataagcatggttgggcttacaggatgtcatga
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