Typha angustifolia (narrow-leaf cattail): 140773744
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Entry
140773744 CDS
T11061
Name
(RefSeq) uncharacterized protein
KO
K15443
tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tang03016
]
140773744
Transfer RNA biogenesis [BR:
tang03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
140773744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
WDR55
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
140773744
NCBI-ProteinID:
XP_072972561
LinkDB
All DBs
Position
13:join(232810..232943,233782..233946,234790..234970,235326..235382,235470..235540,235970..236048,236128..236187,236721..236821,236921..236981,237224..237628)
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AA seq
437 aa
AA seq
DB search
MEEDLIEEGESNTGAEVAPALIAVHPLEQFIAVAVGSELRVFDLKGDCPICLLDDSGGPS
HSDSVRDISFGANGNLFASAGDDKLVKIWKTGSWNCIRTVCAEKRVSAIAISNDGQFVTF
ADKFGVVWLVRLGEDGDGHASVDNRGVPVLGHYCSIITSMKFSPDGQFIATADRDFKIRI
TSFPKQPLKGAHEIQSFCLGHTDFVSCLTFACPSAHVEGFLLSGSGDSTVRLWDFINGRL
LDTCEVGAKSGLLQLDEIKESNPAVTDICASCNGSLVAVTIQSLNGVILLSCNFSAKTLS
IAKVLTMEKSYIPTSLGLSLSAERLWTMMGASDSPTSGCTRLLTRVKIVSGFCRDSSASQ
SHDPVVLMDDEVPGGEKLLLQLQGSVDVAEQEAMLASAAAALRVSMHNMLIKKQYSVEKR
ELRKRSRNDKKLNNKPC
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggatttgatcgaagaaggagagagcaatacgggagcggaggtcgccccagct
ttgatcgccgtccaccctctcgaacaattcattgctgttgctgtcggatccgagctccgc
gtctttgatttaaaaggtgattgcccaatttgtctgttagacgattctggtggtccttct
cattctgattctgtaagagatatttcattcggtgcaaatggcaacctctttgcatctgct
ggtgatgataaacttgttaagatatggaaaactggttcctggaattgcattcggactgta
tgtgctgagaaacgagtcagtgcaattgctataagtaatgatggccaattcgtaacattt
gctgataaatttggagttgtttggttagtgagattgggtgaagatggtgatgggcatgca
tcagttgataacaggggtgtgccagttctaggtcattactgcagcataattactagcatg
aaattctcaccagatggacaattcattgctactgctgatcgggatttcaaaattcgtatc
acttcattcccaaaacagcctttaaagggtgcacatgaaatacaaagtttctgccttggc
catacagattttgtgtcatgccttacatttgcatgcccttcagctcacgttgagggattt
cttttatctggaagtggtgattcaactgttcgtttgtgggatttcattaatgggcgcctt
cttgatacttgtgaagttggagctaagtcaggattgctacagctagatgaaatcaaagag
agtaacccagctgtcactgatatatgtgcctcctgtaatggttcactagttgctgttacc
attcaaagcttgaatggagttattcttttgagctgcaacttctcagctaaaaccttgtca
attgccaaggttcttaccatggaaaagagttatatccctacaagcttagggctgagtttg
tctgctgaacgcttatggactatgatgggtgcctctgattcacccacttcgggttgtact
cggttgttgacccgtgtaaagattgtctctggcttctgcagagactcttcagcttcccaa
tctcatgatcctgttgttttgatggatgatgaagtacctggtggcgagaaacttctcttg
caactgcagggaagtgtagacgttgcagagcaagaagcaatgttagcatcggcagcagca
gcattgagagtttctatgcacaatatgttaataaagaagcagtactcagttgagaaaaga
gagctcagaaaaaggagcagaaatgacaagaaactcaacaataaaccctgttga
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