Typha angustifolia (narrow-leaf cattail): 140773837
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Entry
140773837 CDS
T11061
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI2 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tang04121
]
140773837
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
140773837
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
140773837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ariadne
IBR
UBA_ARI1
IBR_2
IBR_1
zf-RING_2
HrcA
Motif
Other DBs
NCBI-GeneID:
140773837
NCBI-ProteinID:
XP_072972705
LinkDB
All DBs
Position
13:join(14003723..14003899,14004117..14004149,14004249..14004528,14006085..14006565,14007392..14007940,14008023..14008201,14008421..14008581)
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AA seq
619 aa
AA seq
DB search
MASDDDLPSSSDPEEEEEEEEEEEGENIYFSDQEDALEETVLQGLEDGRKEDCDWSVSSV
ITKESLLDAQKEDLRKVMELLTLSEQHARTLLIHYRWDVERIFELLDQKGSEQLFSEAGV
TVVENKSCAFSSLSDLVTCNVCFEEIPANAVTEMDCGHCYCNECWTGHFIVKINDGQSRR
IRCMAPKCNAVCDEAVVRNLVSARHPEIADRFDRFLLESYIEDNNKVKWCPSVPHCGNAI
RVKGDICCEVECSCGLQFCFSCLSEAHSPCSCLMWELWIKKCRDESETVNWITVNTKLCP
KCHKPVEKNGGCNLVACICGQAFCWLCGGATGRDHTWSSISGHSCGRFKEDQAKRTEQAR
RDLYRYMHYHNRHKAHTDSLKQESNLKETIQGKISISENKESKIKDYSWVTNGLNRLFRS
RRVLSYSYPFAFYMFGDELFKDEMTTEEREMKQNLFEDQQQQLESNVEKLSSFLEKDFHD
FSDDEVMDTMRHVINLSNVVDRLCKQMYECIQNELLYPLRTTHNIAPYKSKGLERASELT
ICWDSDQSSRSIKASCSRSDTALNRSEATVLGKRLGTQLHGSSSSDDSIYSSHKRAKKDA
HGGGALFDLNVPAEVIDKL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgacgacgatctcccttcatcgagcgacccggaggaggaggaggaggaggag
gaggaggaggagggggagaatatctactttagcgatcaagaggacgccctagaagagacc
gtcctacaaggactcgaagacggtcgcaaggaggactgcgactggtccgtctcatcggtt
atcacaaaagaatcccttttggatgcacagaaggaggatttgcggaaggtgatggaattg
ttaaccctaagtgagcagcacgcgaggacgctgctgattcattaccggtgggacgtggaa
aggatatttgaattgcttgatcagaaggggagcgaacagttgttctctgaggctggtgtg
actgttgtagagaataaatcttgtgccttttctagtttgtcagatttggtcacctgtaat
gtctgcttcgaggaaattcctgccaatgctgtcactgagatggactgtgggcactgctat
tgcaatgaatgttggacgggacatttcattgtcaagattaatgatgggcaaagccggcgc
ataaggtgcatggctcccaagtgtaatgctgtttgtgacgaggcagttgtcaggaactta
gtcagcgcaagacatccagaaattgcagatcgttttgaccgctttttgcttgaatcttac
atagaggacaataataaggtcaaatggtgcccaagtgtgccacattgtggaaatgcaata
cgcgtgaaaggtgatatttgctgtgaggtggaatgttcatgtggacttcaattttgtttc
agttgcttatctgaagcacattcaccttgttcttgcttgatgtgggagctgtggatcaag
aaatgtcgggatgaatcagagactgtgaattggatcacagttaacactaaactttgccct
aaatgtcacaagcctgttgagaagaatggtggctgcaatcttgttgcatgtatatgtgga
caagcattctgttggttatgtggcggtgctacggggcgagaccatacatggtcaagtatt
agtggccacagttgtggtcgattcaaagaggaccaggcaaagagaactgaacaagcgaga
cgcgacctctatcgatatatgcattatcacaaccggcacaaggcgcacacagattctctt
aagcaggaaagcaatcttaaggaaactatccaggggaaaatatctatttcagaaaacaag
gaatccaaaatcaaagattactcttgggtgacaaatggattgaataggctctttagatca
agacgtgttctatcctattcttatccatttgcattttacatgtttggggatgagctcttc
aaggatgagatgactacagaagagagggaaatgaagcaaaacctatttgaggatcagcaa
caacagttagaatctaatgttgaaaagctatctagttttctcgagaaggattttcatgat
ttttctgatgatgaagtcatggacacaatgcggcatgtcattaatctgtccaatgttgtt
gataggctctgcaagcaaatgtatgaatgtatccaaaatgaactgctttaccctctccgt
acgactcacaatattgccccgtacaaatcaaagggcctcgagagggcatcagaactcacc
atttgttgggattctgatcaaagttcgaggagcataaaagcaagctgttctagatcagat
acagctctaaatcgatctgaagcaactgtactaggaaagcgacttggcactcagttgcat
ggatcttcaagttcagacgatagcatatattcgtcacataaacgagccaagaaagatgct
catggaggtggtgcactttttgatcttaacgtgccagctgaggtgattgacaagctatga
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