Typha angustifolia (narrow-leaf cattail): 140774315
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Entry
140774315 CDS
T11061
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang00040
Pentose and glucuronate interconversions
tang01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140774315
Enzymes [BR:
tang01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140774315
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
140774315
NCBI-ProteinID:
XP_072973369
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All DBs
Position
2:join(9397962..9398065,9398277..9398357,9398918..9398971,9400121..9400867,9401003..9401141,9401226..9401447)
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AA seq
448 aa
AA seq
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MAASLWCVRLLLLGIMIVTAGGLGWIGRENLTNSRIGGASRRSLRETMANETTSPSSSMA
ERAVEGAVDDPEAVAAMVSMSIGNSTARRSLGYLSCGTGNPIDDCWRCDPDWHLNRKRLA
DCAIGFGRNALGGREGRFYVVTDSGDDDPVNPKPGTLRYAVIQDDPLWIVFKRDMVITLK
QELIMNSFKTIDGRGANVHIANGACITVQFVTNIIIHGVHIHDCKPTGNAMVRSSPSHYG
WRTMADGDAVSIFGSSHVWVDHCSLSNCADGLVDAVMSSTAITISNNYFTHHNEVMLLGH
SDSYTRDKNMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINS
QGNRYLAPTNPFAKEVTKRVDTESSVWKRWNWRSEGDLLLNGAYFTPSGAGASASYSRAS
SLGAKSSSMVGTITSGAGVLSCRKGRQC
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttctttgtggtgcgttcgactgctacttctagggattatgattgttaccgcg
ggaggactcgggtggattgggcgcgagaacttgaccaattcgaggattgggggagcttcg
agaagatccttgagagagacgatggcgaacgagacgacctctccgtcttcttccatggca
gagagggcagtggagggtgcagtagatgaccctgaagcggttgctgccatggtatctatg
agcatcggcaacagcacggcccggcggtccctgggctacctctcgtgcggcaccggcaac
ccgatcgacgattgctggcggtgcgacccggactggcacctcaaccgcaagcgcctggct
gactgcgctatcgggttcgggcgcaacgctctcggcggccgagaaggccgcttctacgtc
gtcacggattcgggcgacgacgaccccgtcaacccgaaacctggcaccctccgctacgcc
gtgatccaggacgaccccctctggatcgtgttcaagcgcgacatggtcatcaccctcaag
caggagctcatcatgaacagcttcaagaccatcgacggccgcggcgccaacgtccacatc
gccaacggcgcctgcatcaccgtccagttcgtcaccaatatcatcatccacggcgtccac
atccacgactgcaagcccaccggcaacgccatggtgcgcagctccccgtcgcactacggg
tggaggaccatggcggatggggacgccgtgtccatcttcgggtcgagccacgtttgggtg
gatcactgctcgctgtccaattgcgccgatggactcgtggatgcggtgatgtcatccacc
gccattactatctcgaacaactacttcacccatcataacgaggtgatgctcttggggcat
agcgactcgtacacgagggataagaacatgcaagtgaccatagccttcaaccacttcggc
gagggacttatccagaggatgccgaggtgcagacatggctacttccatgttgtaaataac
gactacacccactgggagatgtacgccattggcgggagcgcgaatccaaccatcaacagc
cagggcaaccggtatcttgcccccaccaatcccttcgccaaagaggtgacgaaaagagtg
gacacagaatcgagtgtgtggaagagatggaactggagatcagagggtgacctgcttctc
aacggcgcctacttcaccccctccggggccggggcttcggccagctactcgagggcttcc
agcctcggcgccaagtcctcttccatggtcgggacaataacttccggcgccggcgtcctc
tcgtgccgcaagggccgccagtgctag
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