KEGG   Typha angustifolia (narrow-leaf cattail): 140774358
Entry
140774358         CDS       T11061                                 
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 2 isoform X1
  KO
K10696  E3 ubiquitin-protein ligase BRE1 [EC:2.3.2.27]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tang04121]
    140774358
Enzymes [BR:tang01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     140774358
Ubiquitin system [BR:tang04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   BRE1 proteins
    140774358
SSDB
Motif
Pfam: zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_5 zf-RING_2 CCDC39 RING_XB3-XBAT31 zf-RING_UBOX CC_Bre1 Rab11-FIP3 zf-RING_6 zf-rbx1
Other DBs
NCBI-GeneID: 140774358
NCBI-ProteinID: XP_072973423
LinkDB
Position
13:join(4511932..4511994,4515245..4515406,4515513..4515600,4515721..4515951,4516059..4516226,4516676..4516869,4516991..4517074,4517174..4517293,4517376..4517562,4517692..4517852,4518315..4518386,4518553..4518629,4519807..4520001,4520561..4520633,4520716..4520802,4521673..4521810,4521893..4522095,4522200..4522362,4522665..4522796)
AA seq 865 aa
MASGKRENEASGHGMGDQREQVDAAVLQYQNQKLVQQLEAQKNETHSLEGKLKELRNKQI
SYEKTLISVNKMWNQLVDDLVLFGIRAGGELHCLQELEHEDYSIDAFASCPPEEIFLCRL
LKSDPIENMTENGSVKHVQEALALRHSATVNLMKHLQETIAATRARNECLASASQVKISS
EDAIVQLQNHNNYLREVVKNMRQAIDVLHQKHNKFADEINSYIQSHSTQQSAIKRLSDEL
EERMGELEESRRKLVILQMQKHGASMINASLANAVNGNNSPDKPTDKSRGWQELKDSVEE
AKTLANSRLFELQEAQEDNLILSKQLEDLQSQLKDDKHVILSKPYYLLNDQLHHLNVELE
RYKGLIESLQADRSNIVLREKELNMKAETADAIKMSISNYEAKIESLELQIQKLIDEKND
LEIKLEETTQDSGRKDIKDEIHVMASALYKEMEMMEAQLNRSKEAACEAISLRQEADSLR
SLLNKKIVEHKILSARCAEQLAETKTLKDLIEKLEKEKQELQIFLDMYGQECFDTRTLME
IRESENKARMQVEYLKANLDEHSLELRVKAANEAEAACQQRLSNAETEIADLRAKLDASE
RDVLELREAIRIKDAEQEAYMTEIETIGQAYEDMQTQNQHLLQQVADRDDYNIKLVSDSV
KMKQTHGFLLSEKQALLKQLQQVNGSLEFSKMKLARGEEQIKAHMTQAIKASLENRHLAI
NLDKAKLELVDAEKELKWLRSAVDSSQNEYERNQKKITELRMELERERNERDKLEEEFEE
VKSEVVEMSSENVEATIQKLQDEIKECKAILKCGVCFDRPKEVVITKCFHLFCYPCIQRN
LEIRHRKCPGCGTPFGQSDVREVKI
NT seq 2598 nt   +upstreamnt  +downstreamnt
atggcatcggggaagagggagaacgaagcatccggccatggcatgggggatcagagagaa
caagtggatgctgcagttcttcaatatcagaatcaaaagcttgtccaacagctagaggcc
caaaaaaatgaaacacactcgcttgaaggaaaactaaaggagttgaggaacaaacagatt
tcttatgagaagactctgatttctgtgaacaaaatgtggaatcagctagttgatgatctg
gtactttttgggatacgtgctggtggggagttacattgtttacaagaattggaacatgaa
gattactctatagatgcatttgcatcatgtcctccggaggagatatttctttgtagactt
ttaaaatcagaccctattgagaatatgacagagaatggatcagtaaaacatgttcaagaa
gcccttgctttgcgtcattcggcaaccgtgaatctgatgaagcatctccaggagactatt
gctgctacaagggctagaaatgagtgtttggcatcggcttcacaagtaaagatatcttca
gaagatgctattgtgcaactgcaaaaccataacaactacttgagagaggttgttaaaaat
atgcgtcaggccattgatgttcttcatcagaagcacaacaaatttgcagatgaaataaac
agttacattcagagccattcaacacaacaatctgcaataaagcgcctttcagatgagttg
gaagaacgcatgggagagcttgaggaaagtcgaagaaagctagttattctacaaatgcag
aaacacggagcatctatgataaatgcttcacttgcaaatgctgtgaatggaaacaattca
cctgataaacctacagataagtctagaggttggcaagagctgaaagactcagttgaggag
gctaagacattggcaaatagccgtctttttgaacttcaggaagcccaagaagataacttg
atcctgtccaagcagctggaagatcttcaaagccagttgaaggatgataagcatgtaatc
ttatcaaaaccctactacctactcaatgatcaactccaccatctaaatgtagaacttgaa
cgatacaaaggattgatagagtccctacaggctgacaggagcaacatagtgcttagggag
aaagaattgaacatgaaagcagagacagcagacgctattaagatgtctattagcaattat
gaggctaagattgaatcattggagcttcagattcagaaacttattgatgaaaaaaatgat
cttgagattaaattggaagagacaacacaggattcaggtagaaaagatatcaaggatgag
attcatgtgatggcttcagcgctatataaagagatggaaatgatggaagcccaattgaat
aggtctaaggaagcagcttgtgaagcaatttcgttacgtcaagaggctgattctttgaga
tctttgttaaataagaagattgtagaacacaaaatcttatcggctagatgtgctgaacaa
cttgctgagacaaagactcttaaagatctgattgagaaattggaaaaggaaaaacaggag
ttgcaaattttcttggatatgtatggacaagaatgttttgatactagaactttaatggaa
atcagagaatcggaaaacaaagctcggatgcaagttgaatatttgaaagctaatctagat
gaacatagccttgagttgcgagtgaaagcagcaaatgaggctgaggctgcctgccagcaa
aggctttcaaatgctgaaactgaaattgcagatctaagggcaaagttagatgcttctgaa
agagatgttttggagcttagagaggccataagaattaaagacgcagaacaagaggcttac
atgactgaaattgagactataggccaagcatatgaagatatgcagacgcagaaccaacat
ctgcttcaacaggttgctgatagagatgattataacatcaagctagtttctgatagtgtg
aagatgaagcagacccatgggtttcttctttctgaaaagcaagccttgctaaagcaactc
caacaagttaatggctcacttgagttctccaaaatgaaacttgctcgtggggaagaacag
ataaaagcgcacatgacccaagctattaaggcttccttggaaaataggcaccttgccatc
aatctagacaaagctaagttggagttagttgatgcagagaaagagctcaagtggctcaga
tctgctgttgactcctcccagaatgaatatgagaggaaccaaaagaagattaccgagttg
aggatggagctagagcgtgaaagaaatgagagagacaagcttgaagaagaatttgaggaa
gtgaaaagcgaagtggtggagatgagttctgagaatgtagaggctactattcagaagctt
caggatgagattaaagagtgcaaggctattctcaaatgtggtgtatgctttgaccggcca
aaggaggttgttattaccaaatgcttccacctattctgctatccgtgcatccagaggaac
ctcgaaattcgtcatcgtaagtgtcccggttgtggtaccccatttggacagagtgatgtt
cgagaggtgaagatatag

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