KEGG   Typha angustifolia (narrow-leaf cattail): 140774434
Entry
140774434         CDS       T11061                                 
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial-like isoform X1
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang00260  Glycine, serine and threonine metabolism
tang00460  Cyanoamino acid metabolism
tang00630  Glyoxylate and dicarboxylate metabolism
tang00670  One carbon pool by folate
tang01100  Metabolic pathways
tang01110  Biosynthesis of secondary metabolites
tang01200  Carbon metabolism
tang01230  Biosynthesis of amino acids
tang01240  Biosynthesis of cofactors
tang04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:tang00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    140774434
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    140774434
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    140774434
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    140774434
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    140774434
Enzymes [BR:tang01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     140774434
SSDB
Motif
Pfam: SHMT Beta_elim_lyase Aminotran_1_2
Other DBs
NCBI-GeneID: 140774434
NCBI-ProteinID: XP_072973537
LinkDB
Position
13:complement(join(14059264..14059415,14059533..14059643,14059722..14059833,14060165..14060242,14060685..14060750,14061515..14061619,14061720..14061917,14062027..14062119,14062519..14062611,14062865..14062989,14064099..14064175,14064372..14064493,14064739..14064825,14064916..14064936,14065029..14065247))
AA seq 552 aa
MLCAIFRISFRSPIYLTNSIGWGLVTLPTHLAISAPLFLLSTREKKAASEMAMAKALRRL
SSSALSRSSLRYMSSIPSATWTKQLNAPLEVVDPEIADIIELEKARQWKGLELIPSENFT
SLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFGLDPAKWGVNVQS
LSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNES
TGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYSRIRKVCDKQKAILLADMAHISGLVA
AGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYDLEDKINAAVFP
GLQGGPHNHTIAGLAVALKQATTPEYKSYQEQVLSNCAKFAQCLIEKGYDLVSGGTENHL
VLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDISAMVPGGIRMGTPALTSRGFDQEDF
AKVADFFDTAVKLALKIKAGTKGGQKLKDFLATIATDAGFQSEIAKLRHEVEEFAKQFPT
IGFEKESMKYNN
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgttatgtgctatttttcggatttcttttcgttctccgatctatcttaccaacagtata
gggtgggggttggtgactcttcccacccacctcgcgatctctgctcctctctttctccta
tcgacacgagagaagaaggcagcgagcgagatggccatggcgaaggctctcaggaggctc
tcatcctccgctctctcgcggagctccctccgttacatgtcttctattcccagtgccacg
tggacgaagcagctgaatgctccgttggaggttgtggatccggagatcgcagacatcatt
gagctcgagaaagcccggcaatggaagggactcgagctcataccttcagagaattttaca
tcactctccgtgatgcaagcggtgggatctgtcatgactaacaagtacagtgaaggatat
cctggtgcgagatactatggtggaaacgagtacattgacatggcagaatccctgtgtcaa
aagcgtgcactggaagcttttggcttagacccggcaaaatggggagtgaatgtgcagtcg
ctctctggttcccctgccaactttcaagtatatacggcattattgaagccacatgagagg
attatggcccttgatcttcctcatggtggacatctttctcatggttaccagactgatacc
aagaagatatctgctgtttctatattctttgaaacaatgccatataggttaaatgagagt
accggctacattgactatgaccagttggagaaaagtgctactctcttcagacccaaatta
atagttgctggagctagtgcatatgcccgcctctatgattattcacgcattcgaaaggta
tgtgacaagcagaaagcgatacttctagcagatatggcacatatcagtggactagttgca
gctggtgtcattccatctcctttcgagtatgcagatgtagtgacaacaacaactcacaag
tcacttcgtgggccacgtggagccatgatctttttcaggaagggagtaaaagaaataaac
aaacaagggcaagaggttatgtatgacctggaagataagatcaatgctgctgtcttccct
ggtcttcaagggggtcctcacaatcacacaattgctggcttagctgttgcactgaaacag
gcaacaactccagagtataaatcctatcaggagcaagtcctcagtaactgtgcaaaattt
gctcagtgcttaattgagaaaggctatgatcttgtctctggtggaacggaaaatcattta
gtcttggtgaatttgaagaacaaggggattgatgggtctagagttgaaaaggtgttggaa
ttagttcatattgcagctaacaagaacacagtacctggtgacatatcagccatggtacct
ggaggcattaggatgggaacccctgctcttacatctagaggatttgatcaggaggacttt
gcaaaagttgctgactttttcgatactgcagttaaattagcattgaagattaaggctgga
accaaaggagggcaaaaactgaaggactttctagccaccattgcaacagatgccggcttc
caatctgagattgcaaaactacgtcatgaggtggaggaatttgcaaagcagtttccaaca
attggatttgagaaagaaagtatgaagtacaataactga

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