KEGG   Typha angustifolia (narrow-leaf cattail): 140774640
Entry
140774640         CDS       T11061                                 
Name
(RefSeq) uncharacterized protein
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140774640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tang03019]
    140774640
   03041 Spliceosome [BR:tang03041]
    140774640
Messenger RNA biogenesis [BR:tang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     140774640
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     140774640
Spliceosome [BR:tang03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    140774640
SSDB
Motif
Pfam: RRM_1 RRM_7 RBD_DEAH11
Other DBs
NCBI-GeneID: 140774640
NCBI-ProteinID: XP_072973817
LinkDB
Position
13:join(1786362..1786470,1786554..1786622,1786698..1786804,1787284..1787772)
AA seq 257 aa
MAFSNKIGNLLKQAVTSSPSLYQAVRCMSSSKVFVGGLSYGTDDQSLREAFVNYGEVVEA
RVIIDRESGRSRGFGFVTFTSADEASAAITGLDGKDLHGRMIRVNYANDRTGGFRGGYGG
GGGGYGGGGGYGGGGGYGGGGFGGGGYGNSGGYGGGGRFGGNSGGYGGGSDGGNYNAVGG
GGRSDNYINSASGDSYGVNAGVYGGSDATSTGGSTNQFAGSGDQYNSRDEPDNEDDTFDE
SLKDDLDDEPDDYAKKR
NT seq 774 nt   +upstreamnt  +downstreamnt
atggcgttctctaataaaattggaaatctcctcaaacaagctgtaacttccagtccatca
ttatatcaggcagtacgatgtatgtcatcctcaaaagtgtttgttggaggactatcgtat
ggcacagatgatcagagtctgagggaagctttcgttaactatggtgaagttgttgaagct
agagttatcattgaccgagagtctggtaggtcaagggggtttggttttgttactttcacc
tccgctgatgaggcctcagctgccatcactggcttggatgggaaggatcttcatggccgg
atgataagggtcaattacgccaatgatcggactggtggattccgtggaggatatggaggt
ggcggtggcggatatggtggtggtggcggatatggtggtggtggtggatatggtggcggt
ggttttggcggcggtggttatgggaacagcgggggttatggtggtggtggaagatttggt
gggaacagtgggggttatggtggtggcagtgatggtggaaattacaacgctgttggtggt
ggtggcagaagtgataactatatcaacagtgcctctggtgatagctatggtgttaacgca
ggggtgtatggtggtagtgatgccacgagcactggtggcagcacaaaccagtttgcaggc
agtggcgaccagtacaatagtcgagacgagcctgataatgaggatgatacatttgatgag
agtttgaaggatgatcttgatgatgagccagatgactatgccaaaaagagatga

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