Typha angustifolia (narrow-leaf cattail): 140774704
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Entry
140774704 CDS
T11061
Name
(RefSeq) histone acetyltransferase GCN5-like isoform X1
KO
K06062
histone acetyltransferase [EC:
2.3.1.48
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
140774704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tang03021
]
140774704
03036 Chromosome and associated proteins [BR:
tang03036
]
140774704
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
140774704
Transcription machinery [BR:
tang03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
140774704
Chromosome and associated proteins [BR:
tang03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
140774704
HAT complexes
PCAF complex
140774704
STAGA complex
140774704
TFTC complex
140774704
SAGA complex
140774704
SLIK complex
140774704
ADA-HAT complex
140774704
HAT-A2 complex
140774704
ATAC complex
140774704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
NOA36
Nop14
Cwf_Cwc_15
CDC45
RNA_pol_3_Rpc31
PPP4R2
YL1
Motif
Other DBs
NCBI-GeneID:
140774704
NCBI-ProteinID:
XP_072973893
LinkDB
All DBs
Position
13:complement(join(439676..439739,439881..440022,440099..440192,440408..440523,441309..441363,442502..442570,443542..443641,443914..443957,444485..444653,450823..450894,451101..451181,451369..451433,452104..452703))
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AA seq
556 aa
AA seq
DB search
MDPVRSRSSQTPSPSHSASASASSAVHHKRKFPGAPGPSAASAAAPFSLSDAGAVTSNDD
LDSISAREEEDDDSDEEDDDDDEEDDDDDEEEEDNDSMRTFTTARLETPGGGAASGNPRS
NKPPKPESNPIPKVEAPGSGAAEIGGKDGNAAQSGQQNAANAASLMPGIVVKEDTVKGIF
TENIQTSGAYSAREEGLKREEDAGRLKFLCYANDGIDEHMIWLIGLKNIFARQLPNMPKE
YIVRLVMDRSHKSMMVIRHNLVVGGITYRPYKSQKFGEIAFCAITSDEQVKGYGTRLMNH
LKQHARDVDGLTHFLTYADNNAVIYFIKQGFTKEITLEKERWLGYIKDYDGGILMECKIF
PKLPYTDLATMIRKQRQAIDEKIKDLSNCHIVYPGIDFQKKEAGIPRKPMKPEDIPGLKE
AGWTPDQWGHSRIKTANGTDTVAYRQQLIVFMRGLLKMMNEHPDAWPFREPVDARDVPDY
YDIIKDPMDLRTMSKRLESEQYYVTFEMFVADVKRMFLNARTYNSPETIYYKCSTRLENY
FSNKVQAHLFQTSNKN
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggacccggtccgatcccggagctctcaaacaccttccccctcccactccgcctccgcc
tctgcctccagcgccgtccatcacaagcgcaagtttcccggcgcccccggcccctccgcc
gcctctgccgccgcacccttctctctctccgacgccggtgccgtgacctccaacgacgac
ctagacagcatcagcgcccgcgaggaggaggacgacgactcggatgaggaagacgacgac
gatgacgaggaagacgatgacgatgacgaggaggaggaggacaacgactccatgaggaca
ttcaccaccgcacgcttagaaacccctgggggaggagccgcctctggtaaccctaggagc
aataagccaccgaagccggagagtaatccgattcctaaggtcgaggctccgggtagtgga
gcagcggagattggtgggaaggatgggaatgccgctcaatcaggacagcagaatgccgcc
aatgcggcgagcttgatgcctgggatcgtagtgaaggaggacacagtgaaggggattttt
accgagaatatacagacgagtggggcttacagtgccagggaggaagggctgaagagagag
gaagatgctggaagacttaaatttttgtgctatgcaaatgatggaattgacgaacatatg
atatggcttattggattgaagaatatatttgctcggcaacttcctaatatgcccaaggag
tacattgttcgccttgtcatggatagaagccacaagtcaatgatggttatcaggcataat
ttggttgttggaggcattacataccgtccctataaaagtcaaaaatttggcgagatagca
ttttgtgcaatcacatcagatgaacaagttaaaggttatggcacaagattgatgaatcac
ttgaaacaacatgctcgtgatgttgatgggcttactcattttctaacatatgcggacaac
aatgctgtcatctattttataaaacagggcttcacaaaggagatcaccttggagaaagaa
agatggctggggtatattaaagactatgatggaggaatattgatggagtgcaagattttt
ccaaaacttccctatacagatttggcaacaatgatacgcaaacaaaggcaggcaattgat
gagaaaattaaagatctctccaactgtcacattgtttatcccggaattgactttcaaaag
aaagaagcaggtatcccaagaaaacccatgaaacctgaggacatccctggtctcaaggaa
gcaggttggactcctgatcaatggggacactcaagaattaagacagcaaatggaacagat
accgttgcctatcggcaacaactgatagtctttatgcgaggacttttgaagatgatgaat
gagcatccagatgcttggccatttagggaaccggtagatgcacgagacgtacctgattat
tatgatatcattaaagatccaatggatttgaggacaatgtcaaagagactggagtcagag
cagtattatgttacttttgagatgtttgttgctgacgtcaagagaatgtttttaaatgct
cgcacatacaactcccctgagaccatatattacaaatgttctacgcggcttgaaaactac
ttctcgaacaaagtccaggcacatttatttcaaacgtcaaacaagaattag
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