Typha angustifolia (narrow-leaf cattail): 140774835
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Entry
140774835 CDS
T11061
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI2
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tang04121
]
140774835
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
140774835
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
140774835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ariadne
IBR
UBA_ARI1
IBR_2
IBR_1
Motif
Other DBs
NCBI-GeneID:
140774835
NCBI-ProteinID:
XP_072974080
LinkDB
All DBs
Position
13:join(18178845..18179057,18179294..18179326,18179436..18179718,18180236..18180716,18181236..18181784,18181857..18182026,18182174..18182289)
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AA seq
614 aa
AA seq
DB search
MASDDGDFPSSSDLEEEEEDEKEDCYFSHLEEEVDEKEDCYLSDREEAFEETALQVIEDG
AEEDCLLSVSSVITKDSLLGAQKEDLRKVMDLLCLRENHARTLLIHFRWDVERIFELLDQ
KGRERLFSDAGVAVVENKVRTLSSTSLNLFTCNICFEEVPPNGVTEMDCGHCYCNECWTG
HFIVKINDGLSRCIKCMAPKCNAVCDEAVVRNLVSAKHPDIADRFERFLLESYIEDNNNV
KWCPSVPHCGNAIHVKGDTYCEVECTCGLQFCFRCLSEAHSPCSCLMWEFWIRKCQDESE
TVKWITVNTKPCPHCHKHVEKNGGCNLVACICGQAFCWLCGGATGREHTWSSIRGHSCGR
FVEDQAKKTEKTRRDLYRYMHYYNRYKAHMDSLKQESNLKETTQGKIFISENKESSVKDF
SWVTNGLNRLFRSRRVLSYSYPFAFYMFGDELFKDEMTPKDKEMKQNLFEDQQQQLESNV
ERLSSFLEKNFHDFSDDEVMDTMRHVINLCGVVDKICKQMYQCIENELLYPLRATHNIAP
YKSKGLERASELSICWDANQMVKSNCAQSESTLDRDGGTKLGKHSIVPHVSSRPDESSHS
SHKRRRRGAHRGYY
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgatgacggcgatttcccatcgtcgagcgatcttgaggaggaggaggaggac
gagaaagaggattgctactttagccatctggaggaggaggtggacgagaaagaggattgc
tacttgagcgatcgagaggaggctttcgaggagaccgccctccaagtcatcgaagacggc
gccgaagaagattgcctcttgtccgtctcatccgttatcacaaaggattctcttttgggc
gcgcagaaggaagatttgcggaaggtaatggatttgttgtgcctacgcgagaaccacgcg
aggacgctgctgattcacttccgctgggatgtggagaggatctttgagttgttagatcag
aagggaagggaaagattgttctcggatgctggtgtggctgtcgtagaaaataaagttcgc
accttgtctagtacgtcattgaatctgttcacctgtaatatatgtttcgaggaggtccct
cctaatggagtcacagagatggattgtgggcactgctattgcaatgaatgttggacggga
cattttattgtgaagatcaatgatggtctgagtcggtgcattaagtgcatggccccaaag
tgtaatgctgtttgtgatgaggcagtagttaggaatttggtcagtgcaaagcatccggat
attgcagatcgttttgaacgatttttgcttgaatcttatattgaagataataataatgtt
aaatggtgccccagtgtaccacattgtggaaatgcaatccacgttaaaggtgatacttat
tgtgaggtggaatgtacttgtggcctgcagttctgtttcagatgcctgtcagaagcacat
tcaccttgttcgtgcttgatgtgggaattctggattaggaaatgtcaggatgagtcagag
actgtgaaatggattacagttaacactaagccttgtccccactgtcacaagcatgttgag
aagaatggtggctgcaacctagttgcctgtatctgtggacaagcattctgttggttatgt
ggtggtgctacagggcgagaacatacatggtcaagcattagaggccatagttgtggacga
ttcgtagaagatcaggcaaagaagacagagaaaacaaggcgagatctctaccggtacatg
cactattacaaccgatacaaggctcacatggattctcttaagcaggaaagcaatctcaag
gaaactacccagggaaagatatttatttcagaaaacaaggaatccagtgtcaaggatttc
tcttgggtgacaaatggattgaataggctctttagatcaaggcgtgtactttcatattct
tatccatttgcattttacatgttcggagatgagctcttcaaggatgagatgacaccaaag
gacaaagaaatgaagcaaaacttatttgaggaccagcaacaacaactagaatcaaatgtt
gaaagactatctagcttcctagagaagaattttcatgatttttcagatgatgaggtcatg
gacacaatgaggcatgtcatcaacctgtgtggtgttgttgataagatttgcaagcagatg
taccaatgcattgagaatgaattgctgtatccactccgtgcaactcataatattgcacca
tataaatcgaaaggccttgagagggcatcagaactttccatttgttgggatgcgaaccag
atggtaaaaagcaactgtgctcaatcagagtcaactctggacagagatgggggaaccaag
ctaggaaaacattctattgttccccatgtatcttcaagaccggatgagagcagtcattct
tctcataaacgacgcaggagaggagctcatagaggctactattga
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