Typha angustifolia (narrow-leaf cattail): 140774995
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Entry
140774995 CDS
T11061
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang00040
Pentose and glucuronate interconversions
tang01100
Metabolic pathways
Module
tang_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140774995
Enzymes [BR:
tang01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
140774995
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
140774995
NCBI-ProteinID:
XP_072974305
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All DBs
Position
13:complement(join(3288906..3289130,3289215..3289443,3289524..3289813,3290132..3290305,3290416..3290556,3290674..3290817))
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AA seq
400 aa
AA seq
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MKLLLLISFTLLCCFVTNAHGRRHGSSSTSFNVLNYGARANGFTDDSKAFLNAWKAACAA
SGVVRLHIPRGTYFVGQVRFAGPCRNVRSLTVHMKGYLKASTDLSKYVRDHWFEFAYVDR
LTLTGGGTFDGQGAASWPFNKCPKNKNCEVLPTSIKFVSTTNTVVKGITSLNSKFFHMAM
VGCNNVRASNIRITAPSNSPNTDGIHIDSSSGVTIYSSTIGTGDDCISIGQGNSQVLISG
IKCGPGHGISVGSLGRYPGEGDVRGLIVRNCILSGTTNGLRIKTWQNSPARSAARNMSFA
NIIMKSVANPIIIDQMYCPYISCSSKVPSRVMISDIFFRNIRGTSTTPVAVTLRCSRGMP
CQNVNLHDVRLRHVGHQTATAFCSNVNARYSGMQIPPPCK
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttttgctcttaatctcctttacactattatgctgctttgttactaatgcccat
ggcaggaggcatggcagctcttctacctctttcaacgtgctcaactatggtgccagagcc
aatggcttcactgatgatagcaaggcattcttgaatgcatggaaggcggcatgcgcggcg
agcggcgtcgtcaggcttcacataccgagagggacttatttcgtcggccaggttaggttc
gccggtccttgccggaatgttcgatcgttgacggttcatatgaagggatacttgaaggcc
tcaacggatttgagcaagtatgtgagggatcattggttcgaatttgcatatgttgatagg
ttgactttgactggaggagggacctttgatggccaaggagctgcttcatggcctttcaac
aagtgccccaaaaataagaactgcgaagttcttcccacttcgattaagtttgtctcgacg
actaatactgtggtgaaaggtataacatccctgaatagcaagttcttccacatggccatg
gttggctgcaacaatgtcagggctagcaatatcaggataactgcaccatcgaatagcccg
aacactgacggcatccacatcgatagtagctccggtgtcactatatatagctcgacgatc
ggtacaggcgacgattgcatctccattgggcaaggaaattcacaagtactgataagtggc
atcaagtgtggacctggacatggaatcagtgttggaagcttaggaagatacccaggagaa
ggagatgttcgagggctcatcgtgaggaactgcatcctttcaggtactacaaatggccta
aggatcaagacatggcagaattctccagctcgcagcgcggccaggaacatgagcttcgct
aacataataatgaagagcgtcgcaaatcctattatcatcgaccagatgtattgtccttat
atttcttgttcttcaaaggtgccatcgcgtgtcatgatcagcgacatcttcttcaggaac
ataagagggacatcaacaactccggtggctgtgacactcagatgcagcagagggatgcca
tgccagaatgtaaacctgcatgacgtccgtctgaggcacgtcggacatcaaactgcgacc
gcattttgctcgaacgtgaatgcgagatacagcggaatgcagatccccccgccatgcaag
taa
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