KEGG   Typha angustifolia (narrow-leaf cattail): 140775341
Entry
140775341         CDS       T11061                                 
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1 isoform X1
  KO
K01164  ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    140775341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tang03009]
    140775341
   03016 Transfer RNA biogenesis [BR:tang03016]
    140775341
   03029 Mitochondrial biogenesis [BR:tang03029]
    140775341
Enzymes [BR:tang01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     140775341
Ribosome biogenesis [BR:tang03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     140775341
Transfer RNA biogenesis [BR:tang03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    140775341
Mitochondrial biogenesis [BR:tang03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    140775341
SSDB
Motif
Pfam: POPLD POP1_C POP1_N
Other DBs
NCBI-GeneID: 140775341
NCBI-ProteinID: XP_072974674
LinkDB
Position
14:join(10122887..10123338,10123511..10123607,10123841..10123957,10124045..10124275,10124398..10124516,10124602..10125129,10126117..10126225,10126545..10127059,10127878..10128063,10128354..10128542,10128707..10128710)
AA seq 848 aa
MPPERSKPAPNASSSTPPPPPRTLNVQKFAESRASELESLHSIVSGRLGGDFRIQRGKRR
RTTGHRVARSRRRAKRQKVGDGGGGEGEASGKEEKVSRRARRSKVMRSNPELGFTTAGDG
TKRLRTHLWHAKRFAMMKRWGFYLPLGLQGRGRGSRAVLKWLKVGAVAHDASYSLPIQLE
GPEGSLKEILGMVLHPSHSGKLEVAEDLSQLVLRGVCFENALLYHAGPHSQLVAPVIYMW
RPSFKDDNYVSTEQSISPDGCSSFGRKECINSVRQLWIWIHAAAFDEGLDALRSACEKQM
LVSGISVSCNAHEGRIARLELMGAKATQFLQKILHPISKSQRTSEDSEFRNSVLNAFTSS
HLQKDYVLDLLQSNAILSLMVHDPREVPCQGTEPACEVSSASHEKILQEEDNLDSNAMVS
GDSLKNKEILSTLWSNPENHDIFLSDGKTLWDSSSRINPPIPEDILCRDKHQRRLELFHL
NSTNNGRPAIEENCFSRSCPILLLKHAEMGPFLKWWSIIVPLSWVKPFWFSLVSGGANAI
GLRERRWIACNNGLPCFPHDFPDCKAYSLFMASEAAAFDRAAELRPLAFRPPRVPIPSPW
DSIAASTDKGPDIVRGFKSLDAKSSLTVASFQMFIPRTLKSLNQYLEGIHEKHLLSSNME
TSLSEIVGNRKPDYDSGTVDMVLAGKELCLVRVLLHAHKEGVFEDGAIICAPVLADFASW
KVRSEKEEDEYQEQWQLQLPQSYIGSYFTQVDSGKWELQLPKDEASQQSFRWPIGFITTG
FVHGSSKPVAEAFCESNLLSFVRRQQWSQTQSRRPEIFVLVRNMRSASYRRAIARVVIEL
QNDDLHFI
NT seq 2547 nt   +upstreamnt  +downstreamnt
atgcctcccgagagatccaaaccggctccgaatgcctcctcctccactcctccacctcct
ccgcgaaccctaaacgtccagaagttcgcggaatcgcgcgcaagcgagctcgaatccctc
cactccatcgtgtccggccgcttgggcggcgacttccggatacagcgtggaaagaggcgg
cgtaccactggccaccgcgtcgccaggagccggcgccgggccaagcggcagaaggttggg
gacggtggcggcggagagggggaggcgtcggggaaggaggaaaaggtgtcgaggagggcg
aggaggagtaaggtgatgcggagcaatccggagttagggtttacgactgcgggggatggg
acgaagaggttgaggacccatctctggcatgcgaagcgcttcgccatgatgaaacgatgg
gggttttacctccctcttggacttcaaggaagaggaagaggttcgagggccgttttgaag
tggttaaaagttggtgcagttgcacatgatgctagctactctcttcctatccaactagag
ggtccagagggttctttaaaagagatattgggaatggttctacatccttcacattcagga
aagttggaggtcgcagaagacctatcacagcttgtacttcgaggtgtttgctttgaaaat
gctttgctttatcatgctggacctcattctcaattggttgctccagtgatctatatgtgg
cggccgtcctttaaagatgataattacgtcagtactgagcaaagtatatcacccgatggt
tgtagcagctttggtagaaaagaatgcattaattctgtgcgtcaattgtggatatggatt
catgctgctgcttttgatgaaggacttgatgctctgagatctgcatgtgagaagcagatg
cttgtatctggtatctctgtcagttgtaatgcacacgagggacgtattgcaagattggaa
ttaatgggagccaaagcaacacaatttcttcagaaaattttacatcctatatccaagtca
caaaggactagtgaggactctgaattcagaaattctgttttgaatgcttttaccagctct
caccttcagaaagattatgtacttgatcttcttcagtccaatgcaattctatccttaatg
gttcatgatccccgggaagttccatgccagggaactgaacctgcatgtgaagtgtcttct
gctagccatgagaaaattcttcaggaagaggataatctagattcaaatgccatggtcagt
ggggattctctcaagaataaagaaattttgtcaacattgtggtcaaatcctgaaaaccat
gacatttttctttctgacggtaaaactttatgggattccagttctaggataaatcctcct
attccagaagatattctttgcagagataagcatcaaagacgtttagaacttttccatctt
aattcgaccaacaatggaaggccagctattgaagaaaattgttttagtagatcttgccca
attttgctattaaaacatgctgaaatgggcccgtttttgaagtggtggtctattattgta
cctttgagttgggtgaaacctttctggttttctctggtgtcaggtggggctaatgcaatt
ggtctaagagaaagaaggtggattgcatgtaataatggcttaccatgtttcccacatgat
ttccctgattgcaaagcttattctttgtttatggctagtgaagctgctgcatttgataga
gcagcggagcttcgccctcttgcattcagacctccaagagttcctataccttctccatgg
gattccattgcagctagcactgacaaaggacccgacatagtaagaggcttcaagtcatta
gatgcgaaaagctctcttacagtagcttctttccaaatgtttataccaagaacattgaaa
tctttaaatcaatatctagagggcatccatgagaaacatttgctttcttctaacatggaa
acaagcttatctgagattgttggcaataggaagcctgattatgattctggaactgttgac
atggtccttgctggcaaagagctgtgtcttgtaagagtcctgctccacgctcataaggaa
ggtgtttttgaagatggggcaatcatttgtgctccagttctagcagattttgcaagttgg
aaagtgagatcagagaaagaggaagacgaatatcaagaacagtggcaacttcaacttccc
caatcttacattgggtcttatttcactcaggtggattctgggaagtgggaactgcaactg
ccaaaagatgaggctagccagcagtcattcagatggcccattggcttcatcacaaccggg
tttgttcatgggagttccaagcctgtggcagaagcattttgtgaatcaaatcttctatcc
ttcgtgaggaggcaacagtggtctcagacgcagagtagaagacctgaaatctttgtgctg
gtccgaaacatgagatccgcctcttatcggcgtgccatcgccagagttgttattgaactg
cagaatgatgatctccatttcatataa

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