| Entry |
|
|---|
| Name |
(RefSeq) nuclear pore complex protein NUP98A isoform X1
|
|---|
| KO |
| K14297 | nuclear pore complex protein Nup98-Nup96 |
|
|---|
| Organism |
tang Typha angustifolia (narrow-leaf cattail)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:tang00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140775345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:tang03019]
140775345
03036 Chromosome and associated proteins [BR:tang03036]
140775345
Messenger RNA biogenesis [BR:tang03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
140775345
Chromosome and associated proteins [BR:tang03036]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
140775345
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
14:complement(join(9503386..9504047,9505085..9505147,9510585..9510762,9510880..9510996,9511116..9511254,9511684..9511744,9511826..9511910,9512069..9512703,9513082..9513309,9513577..9514218,9516844..9517125,9517728..9517746))
|
|---|
| AA seq |
1036 aa
MFGSTNPFGQSSSSPFGSQSVFGQTSNVGTNPFAPKPFGSPTPFGSQTGSSIFGGTSTGV
FGQPSTPTFGASSAPAFGSTVPAFGASSTPAFGSSSSSFGGSSLFGQKPAFGGFGSSSSQ
SSPFGSTFQQTQPAFGSNVFGSTTPFGAPSQPAFGAPSTPAFGATSTPAFGATSTPAFGA
TSTPAFGATSTPAFGATSTPAFGATSTPAFGSTSTSLFGNTGTAFGVSSTPAFGSTVTPA
FGGSNTSVFGSPSTPAFGATTTPAFGASSAPAFGASSSPSFSFGSTPSFGQSASTFGSTP
FGTTPPFGAQSSPFGSQAATPTFGSPGFGQSTFGGQAGGSRVAAYTPTPEVDGGTGTQPA
GKLESISAMPVYKDKSHEELRWEDYQRGDKGGPNPSGQPAGGIGFSAPTQSSPFGATGAF
GQTAANPFSSSTASNPFALKTPAFGATGFGSTSTSLFSSPFSSSSSSPFGSTSSTPTLFG
GPTGAGFGSNTSSSIFGGTTTPAFSSSPSIFGSSMAGSGSAFGSGLTFGNTQSSGLFQSS
APSFGQAPSPFGQPSTGFQQNTPAFGSNLFSTPSTGFGGSLFSSSTPSIFPSSTPAGFGQ
TTPSLSTPFQAAAPLQTSSAFSFGNFGQTPASSGGFGAGSNIFSQGTFGQPVASQSNMVM
QPAPITNPFGTLPAMPQMSIGRVGSAPSVQYGISSMPVAEKPIPVKTLSTLVPRHLSQRR
IRLLPRKYHPKTDGPKVPFFADEEEAPSTPKADAFFVPRENPRALIIRPIEQWPSRSTAD
KQLILKNGIGPSKQNGKVLEEPSAPAVSEPFEEDHYDSQTRNHQMAEQNDIQSPSKTIQK
ANGVHEDQTQKGFKAAIVYEHGADVEALMPKLRHADYYTEPRIQELAAKERAEPGFCRHV
KDFVVGRHGYGSIKFFGETDVRTLDLESIVQFNTREVIVYKDESKKPPVGQGLNKPAEVT
LLNIKCMNKKTGQQYTEGPRIEKYKEMLTKKAEEQGAEFVSYDPVKGEWKFKVKHFSSYE
FGEGDTIILETSPLSC |
|---|
| NT seq |
3111 nt +upstreamnt +downstreamnt
atgttcggttcgaccaatccatttgggcagtcttctagtagcccctttggttctcagtct
gtatttggccaaacaagcaacgtcgggaccaatccttttgctccgaagccttttggtagt
cctactccttttgggtcacagacagggagctcgatatttgggggcacatcaactggcgtc
tttggacaaccttcaacacccacattcggtgcttcgtcagctcctgcttttggaagtact
gttcctgcctttggtgcatcatcaactcctgcatttggcagttcttcctcttcatttggt
gggtcatctttatttggccagaagccagcctttggaggctttggatcatcatctagccaa
tcaagtccgtttggaagcacatttcagcaaacacaaccagcatttggcagcaatgtcttt
ggttccacaacaccttttggtgcaccaagtcaacctgcatttggtgctccaagtacccca
gcctttggtgcgacaagtaccccagcctttggtgcgacgagtaccccagcctttggtgcg
acaagtaccccagcctttggtgcaacaagtaccccagccttcggtgccacaagtacccca
gccttcggtgccacaagtaccccagcatttgggtccacatcaacttcgttatttggtaat
actggaacagcatttggtgtttcaagtaccccagcatttggttcaacagtgacaccagcc
tttggtggttcaaatacatctgtttttggatctccaagcactcctgcatttggcgcaact
actacaccagcatttggagcttcaagtgctcctgcttttggtgcatcaagtagtccatct
ttcagttttggctctacaccatcttttggacaatcagcctccacatttgggagcactcct
tttggaacaactcctccttttggtgctcagagttccccatttggttctcaagcagcaaca
ccaacatttggtagccctggttttggacaatccacttttggaggtcaagcaggaggaagc
cgagtagcagcttataccccaacaccggaggttgatggtggcactggtacgcagcccgct
gggaagttggaatctatttctgccatgcctgtgtataaagataagagtcatgaagaattg
agatgggaggactatcaacgtggagacaaagggggtccaaacccttctgggcagcctgca
ggtgggattggtttttcagctccaacacaatcaagcccttttggtgccacaggtgcattt
ggacagacagctgcaaatcctttttcttcctctacagcttctaatccatttgcacttaaa
acacctgcttttggtgcaactggttttggttccacatctacatcacttttcagctcccca
tttagttcatcatcatcaagcccctttggttcaacctcgtctactcctacactgtttggt
ggacccactggtgctggatttggttcaaatacttcatcgtcaatttttggtggaacaacc
acacctgctttcagttcttcaccgtcaatttttggctcatcaatggcgggttcaggttca
gcttttggtagtggcttgacttttggtaatactcaatcatctgggctatttcagtcctcg
gctccatcgtttgggcaagcaccttctccttttgggcaaccatctacagggtttcaacag
aacacaccagcttttggttcaaatctgtttagtaccccatcaacagggtttggaggaagt
ttgttcagcagctcaacaccttcgatatttccttcaagcactccagcagggtttggtcag
acaactccttccctatcaacaccctttcaagcagctgcgccgctacagacatcaagtgcc
ttttcatttgggaatttcggtcagacaccagcatcttcaggtggctttggtgctggttcc
aacattttcagtcagggtacctttgggcaacctgttgctagtcaatccaatatggtcatg
caaccagctcctattacaaatccttttggtactcttccagcgatgcctcagatgtctatt
ggccgtgttggttctgccccttcagttcagtatggtatttcaagcatgccggttgctgaa
aaaccgattccagtcaaaacactctccactttggttccaagacacctctctcagagaagg
ataagattgctgccaaggaaatatcatcccaaaactgatggtccaaaggttccttttttt
gctgatgaagaagaagctccttcaacaccaaaagcagatgcttttttcgtccctagggag
aaccccagagcactgattattcgtccaattgagcagtggccttcgcgaagcactgcagat
aagcaacttattttaaagaatggaatcggtccgagtaagcaaaatggtaaagtattggaa
gagccatctgctcctgcagtaagtgaaccctttgaagaggaccattatgattctcagact
aggaaccaccaaatggctgagcaaaatgacattcaatcaccatccaaaactattcagaag
gcgaacggagttcatgaagaccagacacaaaagggtttcaaggctgcaattgtgtatgag
catggtgcagacgtggaggcgctgatgcccaagctacgccatgctgactactacacagaa
cctcgaatccaggagctggctgctaaagaacgagctgaaccaggcttctgtcgtcatgta
aaagattttgtggtcggcaggcatggctatgggagcatcaaattctttggtgaaactgat
gtgaggacgcttgaccttgagtctattgtccagttcaacacccgtgaggtgattgtatac
aaggatgaaagcaagaagcctccagttggacaggggctcaacaagcctgcagaggtgaca
cttcttaatattaagtgcatgaacaagaagacaggccagcagtacacagaaggacctaga
attgagaaatacaaggaaatgctgacaaagaaagctgaggagcagggcgctgaattcgta
tcttatgacccagtgaagggcgaatggaagttcaaggtcaagcacttcagcagctatgag
ttcggcgaaggagacaccattatcttagagacctcccctttaagttgttga |
|---|
