KEGG   Typha angustifolia (narrow-leaf cattail): 140775465
Entry
140775465         CDS       T11061                                 
Name
(RefSeq) ubiquitin-ribosomal protein eS31z fusion protein
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03010  Ribosome
tang04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    140775465
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    140775465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:tang03011]
    140775465
   04121 Ubiquitin system [BR:tang04121]
    140775465
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tang04147]
    140775465
Ribosome [BR:tang03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    140775465
  Archaea
    140775465
Ubiquitin system [BR:tang04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   140775465
Exosome [BR:tang04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   140775465
  Exosomal proteins of colorectal cancer cells
   140775465
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N Plexin_RBD DUF2604 UBL_UBAC1 TBK1_ULD Fer2_3 Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 140775465
NCBI-ProteinID: XP_072974880
LinkDB
Position
14:9838244..9838714
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDATGKVTRLRK
ECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKQGE
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacggggaagacgatcaccctcgaggtggagtcctcc
gatacgattgataatgttaaggccaagatccaggacaaggaagggattcccccggaccag
caaaggctcatctttgcgggcaagcagctcgaggacggacggaccctagccgactacaat
atacagaaggagtcgacgctgcatctcgtgctccgcctccgcggcggcgcgaagaagaga
aagaagaagacctacaccaagcccaagaagatcaagcacaagaagaagaaggtcaagctc
gccgtgctccagttctacaaggtcgacgacgccaccgggaaggttacccgcctcaggaag
gagtgcccgaatgcggagtgtggggctggcaccttcatggcgaaccacttcgatcgacac
tactgcgggaagtgtgggctcacctacgtctaccagaagcaaggcgagtga

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