KEGG   Typha angustifolia (narrow-leaf cattail): 140775470
Entry
140775470         CDS       T11061                                 
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like
  KO
K12890  serine/arginine-rich splicing factor 1
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140775470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tang03041]
    140775470
Spliceosome [BR:tang03041]
 Common components
  Common spliceosomal components
   SR proteins
    140775470
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 RRM_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 140775470
NCBI-ProteinID: XP_072974885
LinkDB
Position
14:complement(join(1359385..1359399,1359486..1359572,1359644..1359677,1361664..1361768,1361838..1361953,1362040..1362096,1362308..1362357,1363203..1363260,1363334..1363380,1363479..1363587,1363674..1363748,1364005..1364070,1365825..1365911))
AA seq 301 aa
MSRRSSRTLYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED
AIRGRDGYNFDGHRLRVELAHGGRGQSSSYDRHSSYSSGGRRGGVSRRSEYRVLVSGLPS
SASWQDLKDHMRKAGDVCFSEVFREGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRA
YIRVKEYDSKRSLSRSRSRSRSYSKSRSPSRSRSYSRSRSPSKSPKAKPARHSLSRSRSK
SASPHPRSGSKGRSLSRSRSRSKSPNASPPPGKSASPSPRKRSPSRSRSPSRSRSPAAKS
E
NT seq 906 nt   +upstreamnt  +downstreamnt
atgagtaggcgctcgagccgaacactttacgtgggtaacctccctggagacatccgtgag
agagaggtcgaggatctgttttacaagtatggaccaattgttgatattgatttgaagatt
cctccgaggccacctggttatgcatttgtcgagtttgaagatgctcgtgatgctgaagat
gctatacgtggtcgtgatggttataattttgatggccacagattacgagtggaacttgcc
catggcggaaggggccagtcttcatcctacgatcgccatagcagctacagcagtggggga
cgtcgcggtggtgtctctaggcgctctgaatatcgtgttctggtgtctggtctaccttct
tctgcttcatggcaagacctaaaggaccacatgcggaaagctggtgatgtttgtttctct
gaagtgttccgtgagggtggaggtactacaggtattgtagactatacaaactatgatgat
atgaagtatgcgattaggaagctcgatgactcggaattccggaatgcattttcccgggca
tacataagggtgaaggagtatgattccaagcgaagcctatccaggagcagaagccgtagc
cgatcctactcaaaaagccgaagcccaagccgcagtcgcagctacagcaggagcaggagc
ccaagtaagtctccgaaggcaaagccggcacgtcattccttatcacgatctcgatcaaaa
tctgcttcaccccatccacgttcagggtcaaaaggacgctctttgtcaagatcacgatcg
agatccaaatcccctaatgcttctcctcctcctggcaaatcagcaagtccaagccccagg
aaaagaagccctagcaggagcaggagtccatcgcgctctcgttcgcctgctgcgaaatct
gaatga

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