KEGG   Typha angustifolia (narrow-leaf cattail): 140775539
Entry
140775539         CDS       T11061                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03020  RNA polymerase
tang03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    140775539
  09124 Replication and repair
   03420 Nucleotide excision repair
    140775539
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tang03021]
    140775539
   03400 DNA repair and recombination proteins [BR:tang03400]
    140775539
Transcription machinery [BR:tang03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     140775539
  RNA polymerase III system
   RNA polymerase III
     140775539
  RNA polymerase I system
   RNA polymerase I
     140775539
DNA repair and recombination proteins [BR:tang03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      140775539
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat NA-iREase1 DnaT DUF2605
Other DBs
NCBI-GeneID: 140775539
NCBI-ProteinID: XP_072974997
LinkDB
Position
14:complement(join(11291415..11291540,11292549..11292662,11293171..11293347,11293717..11293947))
AA seq 215 aa
MEEGCCLSSMVDHGSVESHRYFLARRTLLEMLRDRGYAVDAAEIDRSLADFRAWWEEKPD
LEHLAFSSHLLSDSSKEVHAIFCGTDPVKLATIRDIYSRFSKENLSRLIVVLQSKMTSKA
REAIKDISKFKIETFQITDLLVNITKHVLMPRHDVLTTEEKDNLLKKYSVEDKQLPRMLE
TDAIARYYGLEKGTVVKVSYDGELTGSHVTYRCVL
NT seq 648 nt   +upstreamnt  +downstreamnt
atggaggaggggtgctgcttgagctcgatggtggatcacgggagtgtggagagccaccgg
tacttcttggctcgccgcacgctcctcgagatgctccgtgaccgggggtacgccgtcgac
gccgccgaaatcgaccgcagcctcgccgacttccgggcgtggtgggaggagaagcccgac
ctcgaacacctcgccttcagctcccatctcctctccgattcctccaaggaggtacatgct
atattttgcggaactgaccctgtcaagttggcaacgatacgtgatatttattctcggttt
agcaaggaaaacttgagtcgattaattgttgtcttacaaagcaaaatgacatccaaagct
cgagaggccatcaaagatatttccaaatttaagatagagacgtttcaaatcactgacttg
ctggtcaacatcacgaagcatgttctgatgccaaggcatgacgtactaacaacagaagag
aaagacaatcttttgaagaagtatagcgtggaggataagcagcttcctcggatgcttgag
actgatgccattgctcgatactacggcctcgagaagggaacagttgtgaaagtttcatac
gatggagagcttactggatcccatgtcacttaccgctgtgttttgtag

DBGET integrated database retrieval system