KEGG   Typha angustifolia (narrow-leaf cattail): 140775652
Entry
140775652         CDS       T11061                                 
Name
(RefSeq) protein transport protein SEC31 homolog B-like isoform X1
  KO
K14005  protein transport protein SEC31
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    140775652
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tang04131]
    140775652
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tang02044]
    140775652
Membrane trafficking [BR:tang04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    140775652
Secretion system [BR:tang02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   140775652
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40 TPR_Sec16 Beta-prop_RIG_2nd Beta-prop_EIPR1 TPR_GEMI5 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML MIOS_WD40 EIF3I Beta-prop_HPS5 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 140775652
NCBI-ProteinID: XP_072975139
LinkDB
Position
14:complement(join(5197496..5197585,5199944..5200176,5201882..5202164,5202247..5202369,5202805..5202972,5203130..5203245,5205602..5205815,5205901..5206083,5206873..5206965,5207121..5207640,5207731..5207858,5207929..5208050,5211121..5211166,5212291..5212410,5212527..5212624,5220675..5220732,5221052..5221157,5221267..5221303,5221408..5221504,5224608..5224730,5224821..5224875,5224981..5225300))
AA seq 1110 aa
MACIKSAQRSALVAFAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSDALELPIVAS
CPSTERFNRLSWSKPGSGASGDYTLGLLAGGLGDGSIGVWNPLKLMSSQDQESAFVARLE
KHTGPVRGLEFSALSPNLLASGADEGELCIWDLANPPEPNLFPSLKSAGSSSQTEVSFAS
WNPKFQHILASTSYNGMTVVWDLRQQKPVTSFSDSNRRRCSVLQWNPDISTQLIIASDDD
NSPSLRVWDVRKTISPLREFVGHTKGVIAMSWCPYDSSFLLTCAKDNRTICWDTVSGEIV
CELPASTNWNFDVHWYPKIPGIISASSFDVKVGIYNIESCSRYTVGDAGFGSPARLRAPK
WLKCPTGASFGFGGKFVSFLPNQSAASTPNCNSEVYVHNLVTEHNLVSRSTEFEAAIHSG
ERSSLRSLCEKKSEDSVSEDEREMWGFLKVMFEEEGTARTKLLAHLGFSVPVEETENVTD
DLGKSFTEALGFNNVGLTEGGGNQFPVDNGEEFFNNPQLSDDSILFEENSSKNGNQIQKE
PEEPQQTSDPSIDDSIQRALVVGDYKGAVLQCISANRMADALVIANVGGPSLWETTRDRY
LKNSTSPYLKVISAMVSNDLMTLVNTRPLNSWKETLALLCTFAQKEEWTVLCDTLGSKLM
TVGNTTAATLCYICAGNIDKTVEIWSRNLKSECGRTYVDLLQDLMEKTIILALATGNKQL
STSLSKLVENYAEMLASQGLLTTAMEYLKLLGSEESVHDLGILRNRIALSVESERDAATS
LPYESSATQVGSLYGADPSTAGVADHSQQYYQQNVPGNQYREGYQQSYGGYQPMQQKQQL
QEYNNPVAFQPSQATQMFLPSQSQQAPQPNFVPSSVSQPSTKTFIPSSLPGLKNAEQYQQ
PSLGSQLYPGVVNPTYQTGPSVSAPQGVGASLTGNAPSHKFPQAVPTNQASRFMPVTNQG
LSQRPGLNPAQPSSPTQPSLTQPSFAPPAPPPTVQTVDTSNVSAELRPVITTLTKLYNET
SKALGGPQGSKKREIEDNSKKIGSLFAKLNGGDISRNAASKLIQLCSALDNGDFPAAMHL
QVLLTTSDWDECNFWLPVLKRMIKTRQTIR
NT seq 3333 nt   +upstreamnt  +downstreamnt
atggcgtgcataaagagcgcgcagcgatctgcgttggttgccttcgccccagatgctcct
tacatggccgccggcaccatggccggcgctgtcgatctctccttcagctcctccgccaat
ctcgagatctttaagctcgacttccaatccgacgccttggagctccccatcgtcgcgtcg
tgccccagcacggagcgattcaatcgcctctcttggtcgaagcccggatccggcgcctcg
ggggactacaccttggggttactcgctggtggccttggcgacggcagcattggtgtctgg
aatcccttaaagttgatgagttcgcaggatcaagagagtgcttttgttgcgcggcttgag
aagcatacaggaccggttcgaggtttggagtttagtgcactttcaccaaatctactagct
tctggggctgatgaaggtgagctctgcatctgggatctagctaatcctccggagccaaat
ctatttccgtcgctcaagagtgctggctccagctcccaaactgaagtctcgtttgcatca
tggaatccaaagtttcaacacatattagcatctacttcctacaatggaatgacagttgtt
tgggatttaagacagcagaagcctgtcacaagcttttcagactcaaatagaaggagatgc
tctgttttgcaatggaatcctgatatttcaacacagttaattattgcatctgatgatgat
aattcaccttctctcagggtttgggatgtgaggaaaacaatatcacctttgagagagttt
gtggggcatacaaaaggtgtgattgccatgtcgtggtgcccttatgacagttcatttttg
cttacttgtgcaaaggacaatagaacaatttgctgggatacagttagtggagagatagta
tgtgagctgccagcaagcactaattggaattttgatgttcactggtatccaaaaattcca
ggaattatatcagcctcttcttttgatgttaaagttgggatttacaatattgagtcttgt
agtcgatatacagttggagatgctggctttggttctcctgcacgactcagagctccaaaa
tggttgaaatgcccaactggtgcatcatttggttttggaggaaaatttgtttcatttctt
ccaaaccaatcagcagcaagtactccaaactgtaattcggaggtttatgtgcataatttg
gtcactgaacataatttggtaagccgttcaactgaattcgaagctgccatacatagtggg
gagagaagttcacttcgatctttgtgtgagaagaagtcagaggactctgtatctgaggat
gaaagagaaatgtggggctttttgaaggttatgtttgaggaagaggggacagcaaggaca
aagttacttgcacatcttggtttcagtgtacctgttgaagagactgagaatgtaacagat
gatcttggaaaaagttttacagaggctcttggttttaataatgttgggctcactgaaggt
gggggcaatcaattccctgttgacaatggagaagagttcttcaacaatcctcagctatct
gatgatagcatcttgtttgaagaaaacagttctaaaaatgggaatcaaatacagaaagaa
cctgaggaacctcagcaaacttctgatccttctattgatgatagtatacaacgtgcacta
gttgttggagactataaaggagcagttttgcagtgcatttctgcaaatcgaatggctgat
gctttggttattgcaaatgtaggaggtccatcgttgtgggaaactactcgtgatcggtat
cttaagaatagtacctcaccctatctaaaggttatttctgcaatggtgagcaacgatctc
atgaccctcgtcaataccaggccactgaattcatggaaggaaacacttgctcttctttgc
acttttgcacaaaaagaggaatggactgttctgtgcgacactcttggttcaaaacttatg
actgtaggaaatacaactgctgcaactctttgttatatctgcgctggaaatattgataaa
actgtggaaatttggtctcgcaacttgaagtctgaatgtggaagaacttatgttgacctt
cttcaggatttaatggagaaaacaataatccttgctctcgcaactggaaataagcagctt
agtacatccttgtcgaaacttgtagagaactatgctgaaatgctagctagtcaaggtctc
ctgacaacagcaatggaatatttgaagcttttgggatcagaagaatctgtgcatgatcta
ggaatcttgagaaatcgaattgctctctcagtagaaagtgagagagatgctgctacaagt
ttgccttatgaaagcagtgcaacgcaagttggatctctttatggtgcagatccgtctacc
gctggtgtagctgaccattctcagcaatattatcagcagaatgttcctggtaatcagtat
agagaaggctaccaacagtcctatggaggatatcaacctatgcagcagaaacaacagttg
caggagtataacaatcccgtggcatttcaaccctcacaggcaacccagatgtttctccct
tcgcagtcacaacaggcccctcagccaaattttgttccatcttctgtgtcacaaccttct
acgaagacctttataccttcaagtttacctggtctgaaaaatgcagaacaatatcagcaa
cccagcctgggttctcagctttatccgggggtcgtgaatcctacgtaccaaactggacca
tcagtctctgctcctcagggtgttggtgcatctttaacaggaaatgctcctagccacaag
tttccacaagctgttccaaccaatcaagcatctagatttatgccagtaaccaatcaaggt
cttagtcaaaggcctgggttgaatcctgcacagccttcaagtccaactcaaccatcactg
acacaaccttcttttgcccctcctgctcctcctcctacagtgcaaacagtagatacttca
aatgtttctgctgagcttagacctgtgatcactacactgacaaaactctataatgagacc
tcaaaagctcttggaggaccacagggatctaaaaagcgtgaaattgaggacaattcaaag
aaaattggctccttgtttgcaaaactcaatggtggagatatatctcgaaatgctgcatca
aagctcattcagctatgcagtgcactggacaatggggattttcctgctgcaatgcatctc
caggtgctcttaacaacgagtgactgggatgagtgcaacttctggcttccagtattgaag
cgcatgatcaagacaaggcagaccataagatga

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