Typha angustifolia (narrow-leaf cattail): 140775668
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Entry
140775668 CDS
T11061
Name
(RefSeq) uncharacterized protein
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tang04121
]
140775668
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140775668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
F-box_5
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
140775668
NCBI-ProteinID:
XP_072975158
LinkDB
All DBs
Position
14:complement(join(11085674..11085973,11086736..11086886,11088262..11088338,11088911..11089103,11091376..11091561,11092031..11092437,11092695..11092922,11094011..11094295))
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AA seq
608 aa
AA seq
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MKGADLINTFLPDELLMEIFHRLEAKPDLDACALVCRKWRRNERASRRTIKIAASGAADR
LLEHAVGRFTGLVNVFIDERLPSAYHNPVVSSRARRNSLSSPAELHNVTGNNSAEENEPE
RFCLSDAGLGSLAQGCKGLEKLSLIWCSAITSLGLIKIAENCRTLKSLDLQGCYVGDQGL
IAIGQSCNLLRDLNLRFCEGLTDTGLVGLAQHRGNSLVSLGIAACAWITDTSLQAVASHC
HCLETLSLDSEFVKNEGIISVARGCGSLKTLKLQCMHISDEALEAVGSSCSSLEMLALYN
FERFTDRSLSSIAKGCKKLRCLTLNDCHLLTDRSLEFVARGCTKLTHLEINGCQNIETSG
LEYIGRLCPGLLELSLFYCPRIRNSAFMEVGRGCSLLQVLQLVDCSSINDDAISHIAQGC
RNIRKLHIRRCYEIGSKGLISVGENCKLLTDLSIQFCERVGDEALIAIAEGCSLRRLNVS
GCHQITGNGLSAVARCCPDLVYLDISVLQHIGDMVLAELSDECPKLKDIVLSHCRQITDV
GLAHLVKGCSQLETCQMVYCPLVTASGVATIVSSCSKIKKVLIEEWKVSERTKRRVGSVL
SFLCVDLL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcgccgatctcatcaacacctttctccctgacgagctgctcatggagatcttc
caccggctcgaggccaagcccgacctcgacgcttgcgccctcgtctgccgcaagtggcgc
cgcaacgagcgggcttcgcgccgcactattaagatcgcggcctccggcgccgccgaccgg
cttctggagcacgctgtcggccgcttcactgggctggtcaacgtcttcatcgacgagcgc
cttccgtccgcctaccacaacccggtcgtctcctctcgcgcgcggagaaatagtctttct
agcccagcagaacttcataatgtgactggaaacaactcggccgaagaaaatgaaccagaa
cgtttctgtctatctgatgctggtctaggatctcttgcccagggttgcaaaggacttgag
aaactaagtttaatctggtgttcagcaataacttctttagggttgataaagatagcagag
aactgcagaactttaaaatccttggaccttcagggttgctatgttggagatcaaggtctt
attgctatcgggcagagttgcaacctacttagagatttgaatttacgtttttgtgaaggg
cttacggatactggtttggttggattggcacaacatcgtggaaattctttagtgtctctt
ggcattgcagcttgtgcttggattacagatacttctctacaagctgttgcatctcattgc
cattgtctggaaaccttatcattggattcagaatttgttaagaatgaagggataatatca
gttgcaagaggatgcgggtctttgaagactctgaagctgcagtgcatgcatattagtgat
gaagctctggaagcagtgggttcatcttgttcttccttggaaatgttggctctttacaac
ttcgagagatttactgacagaagtctttcttctattgcaaaagggtgcaaaaagctcagg
tgtctcactctaaatgactgccatttgttaactgataggagtcttgaatttgttgctcgt
ggctgcaccaaattaacacacttggagattaatggatgccaaaatatagaaacctctgga
ctagagtatattggacgattatgcccaggccttttggaactttctttgttttactgcccg
aggatccgcaacagtgcttttatggaagttggcagaggctgctcacttctacaagttctt
cagttggtggactgctcaagtataaatgatgatgctataagtcatatagctcaaggttgc
aggaacatacgaaaacttcacattcgtcgttgttacgagattggcagtaaaggtttaatc
tctgtgggtgagaactgtaaacttcttacagacctaagtattcaattttgtgaaagggtt
ggtgatgaggcacttattgccattgctgaagggtgttcacttcgacgtttaaatgttagt
gggtgccatcaaattactggtaatggactgagtgctgttgctagatgctgtcctgatctt
gtctacctggatatcagtgtgctgcagcatattggggatatggtgttggctgaactaagc
gatgagtgccctaagctgaaagacattgtgttgtcccattgtcgacaaataacagatgtt
ggtttagctcaccttgtcaagggatgttctcaactagagacctgccaaatggtttactgc
cctcttgtaactgcttctggagtagctactattgtctcgagctgttccaaaataaagaag
gtcctaattgaggagtggaaagtgagtgaaagaacaaagagaagagttggttcggtgtta
tctttcctttgtgttgatctgctataa
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