Typha angustifolia (narrow-leaf cattail): 140775734
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Entry
140775734 CDS
T11061
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang00730
Thiamine metabolism
tang01100
Metabolic pathways
tang01240
Biosynthesis of cofactors
Module
tang_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
140775734
Enzymes [BR:
tang01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
140775734
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GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
140775734
NCBI-ProteinID:
XP_072975242
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Position
14:join(13541448..13541746,13541883..13542010,13542863..13543689,13544388..13545062)
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AA seq
642 aa
AA seq
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MATVQPSFTSMVTKMGTRASFKRPKTAFLPGFEATGVSDSWDKEIIFISSRPKASLVIEP
SAAESTKAKKKKQTVDPSAPEFLPLPSFEQCFPQSTKECSEVVHEDSGHVLKVPFRRVHL
SGEEKSFDTYDTSGPQNINPTLGLPKIRKDWVHRREQLGGPRYTQMFYAKQGIITEEMLF
CATREKLSPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVVSSIEE
EVHKLQWATMWGADTIMDLSTGRHIHETREWILRNSSVPVGTVPIYQALEKVNGIAENLT
WEIFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENF
AYEHWDEILDICNQYDVALSIGDGLRPGSIYDANDSAQFAELLTQGELTRRAWEKDVQVM
NEGPGHIPMHKIPENMEKQLEWCHEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTA
LLCYVTPKEHLGLPNRDDVKAGVISYKIAAHAADLAKGHPYAQAWDDALSKARFEFRWMD
QFALSLDPMTAMSFHDETMPSDGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGTVEE
AVKHGMDAMSAEFMAAKKTVSGEQHGEVGGEIYLPENYAAHT
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgtacaaccctcatttacgtcgatggtgactaagatgggtactcgtgcctcc
ttcaagcgtccgaaaactgcctttttacctggatttgaagcaactggtgtttcggattca
tgggacaaagaaattattttcattagctctaggcctaaagcctctctagtcatcgaaccg
tcagctgctgagtcaacaaaagctaagaagaagaaacaaaccgttgatccttctgctcct
gagtttcttcctcttccttcttttgaacaatgctttccacagagtacaaaagaatgcagc
gaagttgttcacgaggactctggccatgtcctcaaggttccatttcgtagggtccattta
tctggagaggagaagagctttgatacatatgataccagtggcccacaaaacataaatcca
actttgggtcttcccaagataagaaaagactgggttcacaggcgggagcaattaggtggt
ccaagatacacacaaatgttttatgctaaacaaggcattataacagaagagatgttgttc
tgtgccacacgtgagaaacttagcccagaatttgtgcggtcagaggttgcccgtggacgt
gctataatcccttccaacaaaaagcacttggagttggagcccatgatagttggaagaaac
ttcctggtcaaagtgaatgctaatattggaaactcagctgttgtgagctctattgaggaa
gaggtgcacaagcttcagtgggcaacaatgtggggtgctgatactatcatggatctttcc
accggtcgccatatccatgagactcgagaatggattcttcgcaattcttctgtaccagtt
ggcactgtacctatctatcaagcacttgagaaagtaaatggcattgctgaaaaccttacc
tgggaaattttcagagatactctcattgaacaagctgagcagggcgtggattacttcaca
attcatgcaggagtcctgcttcgttacatccctcttacagctaaaaggatgactggaatt
gtttcacgtggaggttcaatccatgccaaatggtgcttggcttatcacaaggagaatttt
gcttatgagcactgggatgaaatacttgacatatgtaatcaatatgatgtagcattatcc
atcggggatggtttgaggcctggttcaatttatgatgccaacgacagtgctcagtttgca
gaacttctgacacagggggaattgacacgccgagcatgggaaaaggatgttcaggtaatg
aatgaaggacctggacatattccaatgcacaaaattccagagaatatggagaaacagttg
gaatggtgtcatgaggcacctttctatacgcttggtcccctaacaactgatattgcacct
gggtatgatcacatcacctcggccatcggtgctgctaacattggagctcttggtactgca
ctcctttgttatgtaactccaaaggaacatcttggcttgcccaatagggatgatgtgaag
gcaggtgttatatcatacaagatagctgcccatgcagctgatttagcgaaagggcacccc
tatgcgcaagcatgggatgatgcactaagcaaggcaagatttgagtttagatggatggac
caatttgctttatctttagatcctatgaccgctatgtctttccatgatgagaccatgcca
tctgatggtgcaaaagttgcacatttctgttcgatgtgtgggccaaaattctgttctatg
aaaattacagaggatgtcaggaaatatgctgaggagcatggatatggtacagtggaggaa
gctgtgaaacatggaatggatgccatgagtgctgaatttatggctgctaagaaaactgtc
agtggggagcaacatggtgaagttggaggagaaatctatcttcccgagaattatgctgct
catacgtga
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