Typha angustifolia (narrow-leaf cattail): 140775824
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Entry
140775824 CDS
T11061
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tang03400
]
140775824
Enzymes [BR:
tang01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
140775824
DNA repair and recombination proteins [BR:
tang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
140775824
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
140775824
NCBI-ProteinID:
XP_072975375
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All DBs
Position
2:complement(join(7198334..7198411,7199206..7199915,7201021..7201172,7201250..7201450,7202124..7202204,7203008..7203123,7204370..7204455,7204641..7204877,7206555..7206666,7207400..7207507))
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AA seq
626 aa
AA seq
DB search
MKIVTYNVNGLRQRVAQHGSLLRLLNALDADIICFQETKLSRQELSADVTMADGYEAFVS
CTCTSKKGRRGYSGVATFCRVASAFASREVALPLAAEEGFTGLLERSRNRETPNDFLLEM
PVKVEDLEDITKEELVKVDSEGRCVITDHGHFVLFNIYGPRAEDDDKERIRFKLLFFNIL
QKRWEHLLAQGKRVFVVGDLNIAPAAIDRCDAEPCFEKNQFRTWLRSLLRDSGGPFFDVF
RSKHPERKEAYTCFSPRIGAEEFNYGSRIDHILIAGSCLHENYDLEGHGLLDCHVEECDI
MTQFRRGNSGNIPKWKGGRSSKLEGSDHVPVYVVMCDIPDLPLHNTPSLAVRYIPEVRGW
QQTIVSFLTKGQISENQGLSSLSSVENIPNEGSDEYITSGTIATHLPNVNSKRKYLDPSV
NRDASFIVNDTERTSLRLENEKVSLSCSKSSVNKKARCTTSSQLTIKSFFQKTNTSLCVG
LESVDTNASNFTVDTGKFSDELSNLTEPSNYQNVTESAENGHFSMRKDCTDPNVKDQDDV
NGSLPLTVEKDNSAMLQWQRIQQKMKMSLPLCKGHGEPCVPRSVKKGPNIGRLFYVCARA
QGPASNPEANCGYFQWASLKAKERCR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgtgacgtacaacgtgaacggacttcgccaacgcgtcgctcagcatggctcc
ctcctccgcctcctcaacgccctcgacgccgacatcatctgcttccaggaaacaaaatta
tcaaggcaagagctgtctgcagatgtaacgatggctgacggatacgaggcatttgtttcc
tgcacctgtacttctaagaaaggacgcagaggatattctggtgtcgcaacattttgccgg
gtggcttcagcatttgctagtcgggaggtggctttaccactagcagcagaagaaggcttt
actggccttcttgagcgttcaagaaacagggagacaccaaacgatttcctccttgaaatg
ccagtgaaagtggaggatctagaggatataacaaaggaggagttagtgaaggtcgatagt
gaggggcgttgtgttatcactgatcatggacatttcgtccttttcaatatatatggccct
cgagctgaagacgatgacaaagaacgaatccggtttaaacttttgttcttcaacatatta
cagaaaagatgggaacatctcttggctcaagggaaaagagtatttgtcgttggtgatctc
aacattgctcctgctgctatagataggtgcgacgcagagccatgttttgagaaaaaccag
tttcggacatggctcagatccttgctaagagatagtggaggtcccttttttgacgttttc
agatcaaaacaccctgaaagaaaagaagcttacacttgtttctcgccacggattggagcg
gaagaattcaattatggttccagaattgaccatattcttatagctggatcatgcctgcat
gaaaattatgatttagaaggtcatggccttctagattgccatgtggaagaatgtgatata
atgacccagttcagaaggggaaactctggcaatataccaaagtggaaaggagggagaagt
agcaaactggaaggttctgatcatgttcctgtttatgtcgttatgtgtgatatacctgat
cttcctctccacaatactccctctttagctgtgagatatattccagaagttcgtggatgg
caacagactatcgtatcttttctcacgaaaggacaaatttccgaaaaccaaggcctctca
agtttatcgtcagttgagaatattcctaatgaaggttctgatgaatatataacatctgga
acaatagcaacacaccttcctaatgtaaattcgaaaaggaagtatctagatccaagtgta
aacagagatgcaagcttcattgttaatgatactgaaagaacttctttgagattggagaat
gaaaaggtctctttatcttgctccaagtcatcagtgaataagaaggcgagatgtaccaca
tcctctcaactaactataaagtccttttttcagaaaactaacactagtctgtgtgttggt
ttggagtctgtagacaccaatgcttcaaattttacagttgatactggaaaatttagtgac
gaattatctaaccttacagaaccttcaaattatcaaaatgttactgaaagtgctgaaaac
ggtcatttctcaatgagaaaggactgcacagatccaaatgttaaagatcaggatgatgta
aatggatctttaccacttacagtggagaaggataattctgcaatgctacagtggcagcgg
attcaacagaaaatgaagatgagcctaccactttgcaaagggcatggtgaaccttgtgtt
ccaaggtctgtgaagaaaggtcctaatataggtcgactattctatgtctgtgctcgtgct
cagggacctgcatccaatccagaagcaaattgtggttacttccagtgggcctctttaaaa
gctaaagagagatgcaggtga
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