Typha angustifolia (narrow-leaf cattail): 140775890
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Entry
140775890 CDS
T11061
Name
(RefSeq) protein spotted leaf 11-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
140775890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tang04121
]
140775890
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140775890
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
U-box type E3
140775890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
Neurochondrin
MLKL_N
HEAT_2
Arm_2
MCAfunc
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
KAP
zf-C3HC4_2
zf-C3HC4
T3SS_ATPase_C
Motif
Other DBs
NCBI-GeneID:
140775890
NCBI-ProteinID:
XP_072975474
LinkDB
All DBs
Position
14:join(420227..420562,423219..423335,423466..423897,423975..425135)
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AA seq
681 aa
AA seq
DB search
MEEEAKGAEAEAAAAAAAPVPMAEDGVKVVVQGLTVAVEEIAAISEFRNAYKKQFCNLSR
RIKLLAPMLEDLKESKVPIPEKAVETLAPLKEALDSAKELLRLGSEGSKFFLVLERDSIM
KRFQEVTSQLEQALAGISLEDLDISDEVREQVELVHSQFKRAKERVDTSDTELFDDLLTV
YSSNSDANLDPALLRRLAEKLQLITISDLKQESLSLHEMAVNSAGDPGKIIERMSMLLKK
IKDFMQTQDLEMGSPTNPKASSPIGKSISPVIPDDFRCPISLELMKDPVIVATGQTYERV
CIEKWLEAGHDTCPKTQQRLSSTSLTPNFVLRSLIAQWCEENGVEPPKRPVNPNKTPSPC
SASEHAKIIELLQKLSSQNLEDQRSAAGELRLLAKRNAENRACIAEAGAIPLLVSLLSTL
DVRTQEHAVTALLNLSIYEENKGRIIISGAVPGIVHVLKRGSMEARENAAATLFSLSVVD
ANKVTIGGSGAIPPLVSLLHNGSQRGKKDAATALFNLCIFQGNKGKAVRAGAIPILMELL
SQPEEGMVDEALAILAILSSHPEGKAAIGAATAIPVLVEVIRSGSPRNKENAAAVLVHLC
NGEHQHQHLAEAQEQGVISLLQELAQSGTDRGKRKAIQLLERMNRFLEQQKQAQADAHAH
SHVQGQAQAQAQAQSQANIEQ
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggcgaagggagcggaagcggaggcggcggcggcggcggcggcgccggtt
ccgatggcggaagatggggtgaaggtggttgtacaagggttgaccgtggcggtggaggag
atcgcggccatatcggagtttaggaatgcgtacaagaagcagttctgtaacctatcgcgg
cggatcaaattactggctccgatgctcgaggatctgaaggagagcaaggtcccgatcccc
gagaaagcggtggagaccctagctccgctgaaggaggcgctagattccgccaaggagctg
cttcgactgggaagcgaggggagcaaattcttcctggttctggagagggatagtataatg
aagagatttcaggaagtcacttctcaacttgaacaagctttggctggaatttctttggag
gatcttgacatatcggatgaagttagagaacaggttgagcttgtgcattctcagtttaaa
agggcaaaagaacgtgtggatacatctgacactgagctctttgatgatcttttaactgtt
tatagtagtaatagcgatgccaatcttgatccagcccttcttcgaagattggcagagaag
ttacagttaattaccatttctgacctcaaacaagaatcactatctttgcatgagatggct
gtaaacagtgctggagatcctggcaaaatcattgaaaggatgtcaatgttgttgaagaag
attaaggatttcatgcagactcaagaccttgaaatgggctcaccaacaaatccaaaggct
tcttctcccattgggaagtccatatctcctgtaataccagatgattttcgttgcccaata
tccttggagttgatgaaggatcctgttattgtggccaccggacagacttatgagcgagtt
tgtatagagaaatggctggaggctggacatgatacatgcccaaagacgcaacaaaggctt
tctagtacatctctaaccccaaattttgtcctccgcagcctcatagctcagtggtgtgag
gaaaatggtgtggagccaccaaaacgccctgttaatcctaacaagacaccctcaccctgc
tctgcaagtgagcatgctaaaattattgagcttctgcagaaattgtcatcccaaaacctt
gaagaccaaagatcagctgctggagagctccgtctccttgccaaaaggaatgctgaaaat
cgtgcttgcattgctgaggctggtgctattcctcttcttgtgagtcttctatcgacgctt
gatgtacgcacccaggagcatgcagtcactgctctcctgaacctctccatctatgaggag
aacaagggtagaataattatatcaggagctgttcctggaatagtccatgtgttaaagagg
ggcagcatggaagcccgggagaatgctgcagccacactcttcagcctctcggtggttgat
gcgaacaaggtaacaattgggggttctggggcaatacctcctcttgtctcattgctgcat
aatggcagtcaacgaggcaaaaaggatgctgctacagcacttttcaacctgtgtatattt
cagggtaacaagggaaaagctgtgagagcaggggcgatcccaatactaatggaacttctg
tcacaaccagaagaagggatggtagatgaggccctcgctatattggcaatactctccagt
caccctgagggaaaggcagccattggtgcagcaacagcaatacctgttctagttgaggtg
atcagaagtggctctccaagaaacaaggagaatgcagcagctgttctggtgcatctttgc
aatggggagcatcagcatcagcaccttgctgaagcacaggagcaaggcgtgatatcctta
ttgcaggagcttgctcaaagtggcacagatcggggaaaaagaaaggcaatacaactgctt
gagcgcatgaatagattcctcgaacaacagaaacaagctcaagctgatgctcatgctcac
agtcatgttcagggtcaagctcaggctcaggctcaggctcagtcacaagcaaatattgag
cagtaa
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