Typha angustifolia (narrow-leaf cattail): 140775970
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Entry
140775970 CDS
T11061
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140775970
04121 Ubiquitin system [BR:
tang04121
]
140775970
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140775970
Membrane trafficking [BR:
tang04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
140775970
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140775970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-Nse
Prok-RING_4
zf-C3HC4_3
zf-RING_10
zf-RING_16
zf-RING-like
zf-RING_Vps41
Rad50_zn_hook
zf-C3H2C3
VPS18_RING_C
FAR1_N
Motif
Other DBs
NCBI-GeneID:
140775970
NCBI-ProteinID:
XP_072975582
LinkDB
All DBs
Position
14:complement(13255839..13256657)
Genome browser
AA seq
272 aa
AA seq
DB search
MDSTVPRRRPAAGDRSPFNPVIVFRSPSNLAASGGGFELFYDDEGGSGLRPLPTTMSEFL
MDSGFDRILDRLTQIETNVVGRDHQPASKATVESMPSVEIAVAHVGVDSHCAVCREPFEL
GTEAKEMPCKHIYHKDCILPWLSLRNSCPICRHELPTDELNSAEQTPVALTIWRLPGGGF
AVGRFSGGRRADEREFPIVFTEMDEGFNESGTPRRILWQSRGNRTREMGGIGGAFRSFFS
FFRRLHPFSSHRHHNSSMRRSSRQASWLGIGR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggactccacggtgccgcgccgccgccccgccgctggcgaccgttccccattcaacccc
gtcatcgtcttccgcagcccttccaatctcgccgcctccgggggtggcttcgagctcttc
tacgacgacgagggcggctccggcctccgccctttgcccaccaccatgtcggaattcttg
atggattctggcttcgaccgcatcctcgatcggctaacccagattgagacgaacgtggtc
ggacgcgaccaccagccggcgtcgaaagccaccgtcgagtcaatgcccagcgtcgagatc
gccgtggcccatgtcggcgtggactcacattgtgctgtctgcagggagccgtttgagctc
ggaaccgaggccaaggagatgccttgcaagcacatctaccataaagattgcatcttgcca
tggctctcgttaaggaattcgtgccccatttgccgccatgagctgcccacggatgaattg
aatagtgccgagcaaactccggtagctttaacgatttggaggcttccgggtggtggattt
gctgttggaagattctcgggaggaaggagagcagacgagcgcgagtttccaattgtgttc
acagaaatggatgagggcttcaatgaaagcggcacaccaagaaggattttatggcagtct
cgagggaatcggacaagggagatgggagggatcggtggagcatttcgtagtttcttctca
tttttcaggcgattgcatcctttctcttctcatagacatcataacagctctatgaggagg
agttcaaggcaggcttcatggttaggcattggaagatag
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