KEGG   Typha angustifolia (narrow-leaf cattail): 140776241
Entry
140776241         CDS       T11061                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K03873  elongin-B
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    140776241
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tang04121]
    140776241
   03400 DNA repair and recombination proteins [BR:tang03400]
    140776241
Ubiquitin system [BR:tang04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     140776241
   Cul5 complex
     140776241
DNA repair and recombination proteins [BR:tang03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     140776241
SSDB
Motif
Pfam: ubiquitin Rad60-SLD UCH_UBL1 Ubiquitin_2 TnpW Dsc3_N UBL_UBAC1 TECR_N
Other DBs
NCBI-GeneID: 140776241
NCBI-ProteinID: XP_072975974
LinkDB
Position
14:complement(join(8010820..8010881,8022844..8022883,8023059..8023244,8027674..8027676))
AA seq 96 aa
MAMYIRVKRNKTTYFVQCDPSETTLNIKQKLHSLIDQSPNNQRLTLVATNDILDDSKTLA
DLKVENDAIVALTLRKDENEFEEVYIARPEDFTSFS
NT seq 291 nt   +upstreamnt  +downstreamnt
atggccatgtatattcgagtaaagcgcaacaagactacctactttgtgcagtgtgatcca
tctgagacaactctgaatattaagcagaaactgcactcattgattgatcaatcacccaat
aatcaacggttgaccctggtagcaactaatgatatattggatgactcaaagacgctggca
gatctgaaggttgaaaatgatgctattgtcgcactgaccctgagaaaagatgaaaacgaa
tttgaggaggtttatattgcacgtccagaagatttcacatcattttcataa

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