Typha angustifolia (narrow-leaf cattail): 140776293
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Entry
140776293 CDS
T11061
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tang03021
]
140776293
Transcription machinery [BR:
tang03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
140776293
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GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
SMEK_N
DUF1367
DUF1198
HVO_0758
Motif
Other DBs
NCBI-GeneID:
140776293
NCBI-ProteinID:
XP_072976055
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Position
14:complement(join(2990050..2991069,2994197..2994346))
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AA seq
389 aa
AA seq
DB search
MEKEELLETFEAARKAADAAGDAAEAERCVDALRRLRKMPVTTKDLVETQVGKRLRYLTK
HSEEKIRTVASDVLHFWKNVVIEEASISSAKKNNLLDKKSRTVVQKSEKVESMKVEKTRK
GGVVKSVVGSEYESLKVEISNGETGIKAEKVSMSEKMQIDRTESGRIEKISAGETAIVGK
IIKEENQVSGIKRQSSDSICPPKLSSIIRCNNPARDKYREILAESFSKVSSETLKSVRQE
IRDILDEVDACDPFRVAVTVESVLFEKLGSQTGTHKQKYRSIMFNLKDSNNPDFRRRVLL
GHVLPENIVNMTPEEMASDERKRENQQIKAKALFECERAGAPKATTDQFKCGRCGQRKTT
YYQLQTRSADEPMTTFVTCVNCNNHWKFC
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggaggagctcctggagaccttcgaggcggcgagaaaggcggcggacgcggcg
ggggatgcggcggaggccgagagatgcgtggatgcgctgcggcggctgaggaagatgccg
gtgacgacgaaggatttggtggagactcaggtggggaaacgccttcgatatctcaccaaa
cattctgaggagaaaattaggactgtggcttctgatgtattacacttctggaagaatgtt
gttattgaggaagcatcaataagtagtgcgaagaagaataacttgctggataagaaatcg
cggacggttgtacagaagtctgaaaaggtagaatctatgaaggttgagaaaacaagaaaa
ggtggagttgtcaagagtgtggtgggctcagaatatgaaagtctgaaggttgagatatca
aatggtgagacaggaataaaggccgagaaggtgtcaatgtcagagaaaatgcaaattgat
agaactgagtcagggagaattgagaaaatctctgcaggtgaaactgcaatagttggaaag
ataattaaggaagagaatcaggtgtctggtattaaaagacaatcatcagactccatttgc
cctccaaagctgtcgtcaatcataagatgtaacaatcctgctagggataagtaccgggaa
attcttgctgagtctttctctaaggtttcaagtgaaactttgaaaagtgtaagacaagaa
ataagggatatcttggatgaagttgatgcatgtgatccatttcgtgttgccgttactgtg
gagtctgttctgtttgaaaagttgggctctcaaactggcactcacaagcaaaagtacaga
tctataatgttcaatttgaaggacagcaataacccagattttcggagaagggttcttctt
ggacatgtgttgcctgaaaatatagtcaatatgacaccagaggagatggctagtgatgag
aggaaacgtgaaaatcagcagatcaaagcaaaggcgttatttgaatgtgaacgtgcaggt
gctcctaaagcaacgaccgatcagttcaaatgtggacgttgtgggcagcgaaagacaacg
tattatcaactgcaaacacggtctgctgatgagccaatgacgacatttgttacttgtgtg
aactgcaacaaccactggaagttctgttga
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