Typha angustifolia (narrow-leaf cattail): 140776372
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Entry
140776372 CDS
T11061
Name
(RefSeq) protein indeterminate-domain 4, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tang03000
]
140776372
Transcription factors [BR:
tang03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
140776372
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_4
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
140776372
NCBI-ProteinID:
XP_072976156
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All DBs
Position
2:join(8035723..8035870,8035963..8036359,8037278..8038478)
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AA seq
581 aa
AA seq
DB search
MATPFFGIREEVNHPQQQPPPLQPPQSASSAPSSSAAPPKKKRNLPGTPNPDAEVIALSP
KTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKEVRRRVYLCPEPTCVHH
EPSRALGDLTGIKKHYCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLF
SRRDSFITHRAFCDALAQESARIPTGMSTIGSHLYGPAGNMSLGLSHVNQQMSSLQDQTH
PSTELLRLGGTGGGSQFDQLMSSANPSVFRGQQPTHSSSFYDDPQSQQSLLQSKPFHGLM
QLPELQPNPNSSSTSATAAAANLFNLSFFSNSSSTSTMNNNNNNNSNSNNNNNNHPNPGS
HQNAHLLIPDQFNSGNGSNTESPTTLFSGNLMSDHIGGGMNSLYNTSVPQMSATALLQKA
AQMGATSGGSGGGSSLLRGFGSTYSSSSTAKPTGFRTNSFGGAGEGSRTQVESENNFEDL
MNSLANGNSNMFGGNAGGGVAPFGGFNQGLGGMDDGKLHQSLSIGDRLTRDFLGVGSMVR
GMGGGGGISQREQHHGLDMSSLDSEMKSGTSSRSFGSGNLQ
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggctacacccttctttggaatcagggaggaggttaatcacccccagcaacaacctccg
ccgctgcagccgccgcaatccgcatcctccgcgccgagctcatccgctgctccaccgaag
aagaaacgaaacctccccggaactccaaatccggatgcggaggtgatagcactctcgccg
aagacgctcatggcgacgaaccggttcatctgcgaggtgtgcaacaaggggttccagcgc
gagcaaaacctgcagctccaccggcgcggccacaacctgccgtggaagctgaagcagaag
aacccgaaggaggtccgccgccgggtctacttgtgcccggagccgacgtgcgtccaccac
gagccgtcccgggcgctcggagacctcaccgggatcaagaagcactactgccggaagcac
ggcgagaagaaatggaagtgcgacaagtgctccaagcgctacgcggttcaatcggattgg
aaggcgcactccaagacctgcggcacgagggagtaccgctgtgactgtggtaccctcttc
tccaggagagatagcttcataactcacagagccttctgtgatgccctagcacaagagagt
gcaagaattccaactgggatgagcactattggaagccacttgtatgggccagctggtaac
atgagcttaggactttctcatgtgaatcagcagatgtcttctttacaagatcaaacacac
ccttccaccgagctcctccgtctcggcggcactggcggcggatcgcaattcgatcagctt
atgtcctccgccaacccttctgtcttccgcgggcagcagccgacgcactcctcgtctttc
tatgatgatcctcagtctcagcagtcacttcttcaaagcaaacctttccatggattgatg
cagctccctgagctgcaaccaaaccctaattcatcatcgacgtccgccaccgccgctgcc
gccaatctcttcaacctcagcttcttctcaaacagcagcagcacaagcaccatgaacaac
aacaacaacaacaacagcaatagcaacaacaacaataacaaccaccctaatcccgggagc
catcagaacgctcatctgctgatccctgatcaattcaacagcggcaatggaagtaacact
gagtcgccaacgacgctcttctcgggcaatctcatgagtgatcacatcgggggcggcatg
aattctctatacaacacatcggtgccgcaaatgtcggccaccgcactgctccagaaggct
gcgcagatgggtgcgacaagtggcgggagcggcggcgggagctccttgttgagaggattc
gggagcacttactctagtagtagcactgcaaagcccactggattcagaactaatagcttt
ggtggagctggagagggctcaagaactcaagtggagagcgagaacaactttgaagacctc
atgaattccctagcaaatgggaatagcaacatgtttggtggcaatgctggaggaggagtt
gcgccatttggaggattcaaccaaggattaggaggcatggatgatggcaaattacaccaa
agtttatccataggagatagattaactagagacttccttggagttggtagtatggtgaga
ggcatgggtggaggtggtggaatatctcaaagagaacaacaccatggactcgacatgagc
tcgctggattcggagatgaagtctgggacttcgagtcgatcattcggaagtggaaatcta
caatga
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