Typha angustifolia (narrow-leaf cattail): 140776419
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Entry
140776419 CDS
T11061
Name
(RefSeq) uncharacterized protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140776419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tang03041
]
140776419
Spliceosome [BR:
tang03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
140776419
Complex C
U4/U6.U5 tri-SnRNP related factors
140776419
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
140776419
NCBI-ProteinID:
XP_072976229
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All DBs
Position
14:complement(join(1554764..1555241,1556930..1557000,1557086..1557215,1558355..1558445,1558530..1558651,1558745..1559034))
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AA seq
393 aa
AA seq
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MANRTDPLAKSIHGTNPQNLVEKILRSKIYQHTYWKEQCFGLTAETLVDKAMELDHLGGT
YGGSRRPTPFMCLVMKMLQIQPEKDIVVEFIKNEDYKYVRILGAFYLRLTGTVTDVYQYL
EPLYNDYRKLRQKLPDGRFSLIHVDEFIDELLTKDYACDVALPRVQKRWTLEAAGTLEPR
RSALEDDFEEEEEKEDEEQVMDSLEADGHEKDYYRGRSPTRERDRDKKRDSYKYRDWDYD
RDYDRDYGRGRERERDRDRGRDRDRDRDRERDRDRHRPRDEKEYGRERDRERDREGRERE
RRDRDRGRYKSRSRSRSRDRRERDREDGEHRKRRARGSASPRRRHGEDGSTRDEPKKKKE
KKEKKSDGTDHPDPEIAEANRLRASLGLAPLKL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaggacggatccgttggcgaagagcatccacgggacaaacccccaaaaccta
gtggagaagatcctgcggtccaagatctaccagcacacgtactggaaggagcagtgcttt
gggctgaccgccgagaccctcgtcgacaaggccatggagctcgaccacctcggtggcacc
tacggtggcagccgcaggcccacccctttcatgtgccttgtcatgaagatgctccagatc
cagcccgagaaggacattgtcgtcgaattcatcaagaatgaggactacaagtatgttcgt
attcttggggctttttatctacggctcacggggactgtcaccgatgtttaccaatatctg
gagcctctttacaatgattaccggaagcttaggcagaagctgccggatggaaggttttcc
ttgattcacgtggatgagtttattgacgagcttttgaccaaagactatgcctgtgatgtt
gcccttccgcgagtccagaagagatggactcttgaagctgctggtacgctggaaccaaga
agaagtgcgctagaagatgattttgaggaggaagaagaaaaagaagatgaagaacaggtt
atggattcactagaagctgatggccatgaaaaggattactatcgcggacgaagtcccacg
agggagagagacagggataaaaagcgtgatagctataaatacagggattgggattatgat
cgagattatgatagggattatggacgagggcgcgaaagggaacgagatcgagatcgtggt
agagatagagacagagacagagacagagaaagggatagagaccgccataggccaagagat
gaaaaggaatatggtagagagagggatagagaaagggatagggaaggtagagagcgggag
agaagggacagagaccgcggacggtacaaaagtcgttccaggagcaggagcagggaccgt
cgagaacgagaccgtgaagatggtgagcatcgcaagaggcgtgctcgtggcagtgcaagt
cctaggaggcgtcatggggaggacggcagcaccagggatgagcctaagaagaagaaagaa
aagaaagaaaagaaaagtgatggtactgatcacccagaccctgaaattgctgaggccaac
aggcttcgtgcttctctcggtttggcaccgcttaagctatga
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