Typha angustifolia (narrow-leaf cattail): 140776425
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Entry
140776425 CDS
T11061
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
140776425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tang03019
]
140776425
04121 Ubiquitin system [BR:
tang04121
]
140776425
03036 Chromosome and associated proteins [BR:
tang03036
]
140776425
03400 DNA repair and recombination proteins [BR:
tang03400
]
140776425
Messenger RNA biogenesis [BR:
tang03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
140776425
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
140776425
Chromosome and associated proteins [BR:
tang03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
140776425
DNA repair and recombination proteins [BR:
tang03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
140776425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
RTT107_BRCT_5
zf-HC5HC2H_2
zf-RING_2
zf-RING_10
zf-RING_5
Prok-RING_4
zf-C3HC4_2
zf-RING_6
PTCB-BRCT
RING_ZNF598
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
140776425
NCBI-ProteinID:
XP_072976238
LinkDB
All DBs
Position
14:join(11964495..11964583,11964862..11964915,11965015..11965085,11965167..11965318,11965722..11966015,11966171..11966271,11966702..11966888,11967028..11967131,11967250..11967346,11967520..11967685,11967973..11968091,11968274..11968633)
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AA seq
597 aa
AA seq
DB search
MADCEELARILTPFFHHLQRMEAELKCSICLNLLEIPTLLPCDHLVCHGCIPQLKKRSSS
CAICSSTFLHRDLRPAVHIREMVKIFSDMDTSIGVILQQRESHDETPSRQHEPPSTAPGF
VESIKISPTNDLPKKVDTSATKEGSWLDASSSETHHSGKMENITKKEHLLQTEESGVGPK
KTKGDKLKNSHGKFNRQPFHTPTRLFADECAFCHSFRTTEASGSMLCYINGKLVAADEAN
QLNVVHVHQKCVEWSPQVYFSGDIVNNLEIELARASKIKCSKCGLKGAALGCYYKSCQRS
FHIPCAVEVPDCRWDCENFHVLCPSHSSEKLPCDSSNAMKRISLTSSSTKINSSMKPAEL
AISWQKDQLDYVLLGSDLTPSDKELLGKFATLTGATVLNKWGPNVTHVIAATNEKGACHR
TQKVLMALLTAKWVITIDWIKACIEAGHLVSEEHFGINLDMHGPFDGPRKGRIRAIEKAP
KLLAGLDFYFSGYFVPFYKRCLEDLVVAAGGTIMEDGFLMSNLSASESSPLTYFVYNEDP
PQEFSSGDLVKVKEERCEEAVAYANRTNAQVIGHTKLLDAIAAFDSHLLNRGKTSIS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcggattgcgaggaattggctcgaattctgacccctttctttcatcacctgcagagg
atggaggctgagctcaaatgctccatctgcttaaacttgctggaaattccaacattgctg
ccctgcgaccacctggtttgccacggttgcattccgcagctaaagaaacggagttcttca
tgtgccatttgcagctcaacttttcttcatcgagatcttagaccagctgtccacataaga
gaaatggtaaaaatatttagtgacatggacacttctattggtgttatccttcagcagagg
gagtctcatgatgagacacccagtagacagcatgagcctccatctactgcacctggcttt
gtggagagtatcaagatatcacccacaaatgatttgcctaagaaagttgacacaagtgcg
acgaaagaaggttcttggctggatgcttcgagttctgaaacccatcattctggaaaaatg
gaaaatatcacaaaaaaggaacatttgttacaaaccgaagagagtggtgtagggccaaag
aaaacgaagggagacaagctgaagaattctcatggcaaattcaacaggcagccatttcat
actcctactcgattgtttgctgatgaatgtgctttctgccattcatttaggaccactgag
gcttctggttcaatgctatgttatataaatggaaaactggtagcagctgatgaagccaat
caattaaatgtcgtgcatgttcatcaaaagtgtgttgaatggtctccccaagtatatttt
tctggtgatattgttaataacttggagattgaacttgcacgtgcttcaaagataaaatgc
agcaaatgtggactgaagggagctgctcttggttgttactataagagctgccaaaggagc
tttcacattccctgtgctgttgaggttccagactgtcgttgggattgtgaaaattttcat
gtgctttgtccttctcattcatcggagaaattaccatgcgatagctccaatgcaatgaag
aggatttcattgaccagttcatcaactaagattaacagttctatgaagccagcagagctg
gcgataagttggcaaaaggatcaacttgattatgtcttacttggatctgatctcactcca
tcagacaaggaacttcttggcaagtttgcaactttgactggtgcaactgtcttaaataag
tggggaccaaatgtcactcatgtcattgcggcaaccaatgagaaaggtgcttgccataga
acacaaaaggtcctcatggctctcttgactgctaaatgggtcatcactattgattggatc
aaagcctgcattgaagctggacatttagtttcggaagagcattttggaatcaaccttgat
atgcatggaccgtttgatggaccaagaaagggaagaattagagcgatagaaaaggcaccg
aagttattagctggattagacttttatttcagtggctacttcgttcctttttacaaacgt
tgcctcgaagaccttgtcgtagctgctggtggaacaatcatggaagatggtttcctaatg
tcgaacttgagtgcgagtgaatcctctccacttacatactttgtttacaatgaggatcct
ccccaagaattcagctcaggagaccttgtcaaggttaaagaggagagatgtgaagaggct
gtagcatatgcaaacaggaccaacgcacaagtcattggtcatacaaagttattggatgcc
attgctgcttttgatagtcatcttctcaatagaggaaaaacatcaatctcttag
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