Typha angustifolia (narrow-leaf cattail): 140776471
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Entry
140776471 CDS
T11061
Name
(RefSeq) amino acid transporter AVT1C-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
140776471
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tang02000
]
140776471
Transporters [BR:
tang02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
140776471
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aa_trans
Trp_Tyr_perm
Motif
Other DBs
NCBI-GeneID:
140776471
NCBI-ProteinID:
XP_072976289
LinkDB
All DBs
Position
14:complement(join(13250735..13250827,13250979..13251041,13251140..13251183,13251337..13251499,13251611..13251746,13251974..13252193,13252272..13252452,13252536..13252559,13252642..13252856,13253257..13253546,13253652..13253839))
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AA seq
538 aa
AA seq
DB search
MMKADEEMCRERVIEFQTDDEENAGLQHDRSSSSSSSSASVSLYNREDSETNSHQLSWPQ
SYRETIDRLSTLSSPTVGFLSGSSFIHVSEPFLRGASAVAAEGLPSYLTKPLVPPATDTE
EGLYGPLPPSTITSKPFLNSPYREVPPSLQSSTSQAITNGINVLCGVGLLTTPYAIKEGG
WLGMLLLFFLGGISCYTGILLKRCLDSSPGSETYPDIGQAAFGKAGRLCISIILYLELYA
CCAEYITLVGDSLSSIFPNAHVNMMGVALGPHQVFVIAAAIAVLPTVWLRNLSWLSYLSA
GGVLASILVVICLFWVGVVDGVGFRTGGTALDFSHLPVALGLYGFCYSGHSVFPNIYSSM
EDRSKFPMVLIFSFLVCTLFYAGVAAAGFLMFGESTQSQFTLNMPQQYWSSSIAVWTTVI
NPLTKYALTMTPVALCLEELLPSNQQSYLTAVSIRTILVLSNVVVALALPFFGFVMALLG
SVFTMLVALILPCVCYLTIQRRSVNALQVSTCISIIMVGVACSCIGSYTSIKQMIDAK
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagccgacgaggagatgtgccgcgaaagggtcatcgagttccagaccgacgac
gaggagaatgctggccttcaacacgatagatcctcatcctcatcctcatcctctgcctcg
gtctctttgtataatcgtgaagactctgagacaaattctcatcaactctcatggccgcaa
agctacagggagacgattgataggctaagtactttgtcttcgccgaccgtcggattcttg
agtggttcaagcttcattcatgtatcggaacccttcttgagaggagcctccgccgtggcc
gcggagggcttgccgtcatatctcaccaagcctctcgttcctcccgccacggacactgaa
gaaggcttgtatggtcctctgccaccatccaccatcacatcgaaaccctttctgaattct
ccttaccgtgaagtgcctccctcgctgcaaagttcgacttctcaggcgatcaccaatgga
atcaatgtactatgtggagtggggcttcttactaccccgtatgcaatcaaagaaggtggg
tggttaggcatgctgctgctgttctttttgggaggcatctcatgttacactgggattttg
ctgaagagatgcttggatagctctcctggatcagagacttatcctgacattggtcaggct
gcatttgggaaagctggtagattatgcatatctattatcctttacttagagctttacgca
tgctgtgcggagtacattacactagtgggtgatagcttgtcttcaattttccccaatgcc
catgttaatatgatgggagttgctttgggtcctcatcaagtttttgtcatagcagcagcc
attgcagttcttccaactgtttggcttagaaaccttagttggctatcttatctttcagct
ggaggagtgcttgcatcaattttggtggtcatctgcttgttttgggttggtgtggttgat
ggagttgggtttcgaacaggaggaactgcactggatttttcgcatcttccagttgcactt
ggattgtatggtttctgctactcagggcattctgttttcccaaatatatattcttcgatg
gaggatcgatcaaagtttccgatggttttaatattcagttttctagtgtgcaccttattt
tatgctggagtagctgcggcgggttttctgatgttcggcgaatctactcagtctcagttt
acacttaatatgccacagcagtactggtcttcaagcatcgcagtttggactacggtaata
aatccactaacgaagtatgccttgacaatgactccagttgccttgtgcctggaagagctc
ctaccatcaaaccaacaatcttacttgactgcagtgtcgatcagaacgatactagttctc
tcaaatgtcgtcgtagctcttgcgcttccattcttcggttttgtcatggcattgctagga
tctgttttcacaatgctggtggcccttattttaccatgtgtgtgctatctcactatccag
cgcagatcggtaaatgctttacaggtctcaacttgcatttcgattattatggtaggagtg
gcatgctcttgcattggctcatacacctcaatcaagcagatgatcgatgccaaatga
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