Typha angustifolia (narrow-leaf cattail): 140776626
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Entry
140776626 CDS
T11061
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140776626
04121 Ubiquitin system [BR:
tang04121
]
140776626
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140776626
Membrane trafficking [BR:
tang04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
140776626
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140776626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
HypA
zf-RING_16
DUF7129
DZR_2
Rad50_zn_hook
zf_RING_Vps8_fungal
zf-Nse
TerY_C
Motif
Other DBs
NCBI-GeneID:
140776626
NCBI-ProteinID:
XP_072976485
LinkDB
All DBs
Position
14:11407101..11408102
Genome browser
AA seq
333 aa
AA seq
DB search
MSSRNTHWCYVCRQAVQPHGHNTTCPSCGEGFVQELNEIGSVVDSFDSFGVDFVEDEDPR
FRIIEALSTLMNQGMAGRSHDVRSRTGRYMDQGMGSGMGPLLFFGGNLPVSMSENVGLEV
LLNGGSGVGDRRANLAEYFVSSGLDALLEQLARNERHGPPPASRSVIDALPTVKINHRHL
RGDAHCPVCKDKFELGAEARELPCKHLYHSDCIVPWLSQHNTCPVCRQQLPSQGSGVSIR
NRSGRQSSNGSGRDTSDDTIRREGQIRRNPLSFLWPFRSSNSSSNSYSGPNSYSSQNSYS
SPNSHHNESGRSSSSAPHEDINQMSYSGWPFDY
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcagaaacacccattggtgctacgtatgcaggcaagcagttcagcctcatggg
cacaacacgacctgccccagttgtggcgaaggctttgtgcaggagctgaatgagataggg
agcgtcgtggactcttttgattcattcggtgtggactttgttgaagatgaggatcccagg
tttagaattattgaagcactgtctactttgatgaatcaagggatggcaggaaggagccac
gatgttcgcagtagaactggcagatacatggaccaagggatgggatctggcatgggtcct
ttactgttttttggcggtaatcttcctgtttcgatgtctgagaatgtaggtcttgaggtt
ctcctaaatggtggctctggagttggcgataggcgtgccaacctagcagagtactttgtc
agttcaggattggatgcccttcttgagcagcttgcacggaacgaaaggcatggccctcca
cctgcttcgcggtcggttattgatgctttgcccacagtgaagataaaccacaggcacctt
cgtggtgatgcgcactgccctgtttgtaaagacaagtttgaattgggagctgaagcacgg
gaactgccatgcaagcatttgtatcactctgattgcattgttccttggttatcccagcac
aatacgtgcccagtttgtcgtcaacagttaccatcacagggctctggtgttagcattcgc
aaccgatcaggtcgtcaaagttcaaatggcagtgggagagacacttcagatgacactatt
aggagagaaggtcaaataaggagaaatccattatcctttctctggccttttcgctcatct
aactccagttccaattcatactcgggtcccaattcttattccagtcaaaattcgtactcc
agtcccaattcgcaccataacgagtcgggacgaagcagttccagtgctcctcatgaagat
atcaaccagatgagctattctgggtggccctttgactattaa
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