Typha angustifolia (narrow-leaf cattail): 140776744
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Entry
140776744 CDS
T11061
Name
(RefSeq) THO complex subunit 7A-like
KO
K13176
THO complex subunit 7
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03013
Nucleocytoplasmic transport
tang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140776744
09122 Translation
03013 Nucleocytoplasmic transport
140776744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tang03019
]
140776744
03041 Spliceosome [BR:
tang03041
]
140776744
Messenger RNA biogenesis [BR:
tang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
140776744
Spliceosome [BR:
tang03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
140776744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
MscS_porin
Motif
Other DBs
NCBI-GeneID:
140776744
NCBI-ProteinID:
XP_072976675
LinkDB
All DBs
Position
2:join(489987..490580,490786..490920)
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AA seq
242 aa
AA seq
DB search
MSTKGRKIAGGGQEMAAHYAFSPLEDDAIIKHRLLTRTTTTRGEPPLKKLHKKFMAFSLE
IEKDADNVSDCERFYKSFLQEITTFELPLLKSKAVVDANLREKESFNELQEEIQRQILQA
QVDIEGLKKQLEESKIDRQHKEECEAIRKLIALQPPRSATQKLISDLEKEIASLEAEHAA
CVRTLDLRKKQFSLLLHVVEELQNTIEDEQKSSAEEMRATMEEQKISIEEGSGGGSEAMA
VD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactaaaggaagaaaaattgctgggggcggtcaagaaatggcagcacattatgct
tttagtcctcttgaagatgatgcaataattaagcacagacttctgactcgaactaccacc
actagaggtgaaccaccattaaagaagcttcacaagaagtttatggcattctcacttgag
attgaaaaggatgcagataatgtcagtgattgtgagagattctacaagtcctttctacaa
gagataaccacttttgagcttcctcttcttaaaagcaaagcggttgttgatgcaaacctt
agagagaaggaaagtttcaatgagctgcaagaagaaatccaacgtcaaatcttgcaagct
caggttgatattgagggcctgaaaaagcaacttgaggagagcaagattgacaggcagcac
aaggaggagtgtgaggcaatcaggaaattgattgctttgcagcccccacggtcagcaact
cagaaacttatttcagatcttgagaaggaaattgcctccttggaggctgagcatgctgca
tgtgtgaggaccttagatctcaggaaaaaacagttttctcttcttctgcatgtggttgaa
gagttgcaaaacactattgaggacgagcagaagagctccgcagaagagatgagagctacc
atggaggagcagaaaattagcatcgaagaaggcagcggtggtggttcagaagccatggct
gtagactga
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