KEGG T11061: 140777135

Typha angustifolia (narrow-leaf cattail): 140777135

Entry

140777135         CDS       T11061

Name

(RefSeq) FACT complex subunit SSRP1-like

K09272

FACT complex subunit SSRP1/POB3

Organism

tang Typha angustifolia (narrow-leaf cattail)

Brite

KEGG Orthology (KO) [BR:tang00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tang03000]
    140777135
   03036 Chromosome and associated proteins [BR:tang03036]
    140777135
Transcription factors [BR:tang03000]
Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG2-related
    140777135
Chromosome and associated proteins [BR:tang03036]
Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    FACT complex
     140777135

SSDB

Motif

Pfam:

PH1_SSRP1-like POB3_N SSrecog HMG_box Rttp106-like_middle HMG_box_2 CDC45 HMG_WDHD1 DNA_pol_phi YL1

Other DBs

NCBI-GeneID:

140777135

NCBI-ProteinID:

XP_072977188

LinkDB

Position

1:complement(join(505016..505146,505483..505561,506408..506590,506731..506829,506905..507046,507127..507278,507385..507582,508094..508186,508301..508387,508583..508691,508801..508892,508980..509063,509580..509716,510094..510199,510385..510570,510808..510861))

AA seq 643 aa
MADGHLFNNILLRGRGGNNPGQFRVHSGGIAWKKLGGGKVVEVEKTDIADVTWMKVPRTY
QFRVRTKEGLFYKFTGFREQDVSNLTNFIQKSMGITAQEKQLSVSGHNWGEVDISGNVLT
FMVGSKQAFEVSLSDVAQSELQGKNDVYLEFHVDDTAGANEKDSLVDLSFHIPNSNTQYI
GDESRNAAQVFLDKILSMADVGSNDESVVTFEGIAILTPRGRYNVELHLSFLRLQGQAND
FKIQFSSVVRLFLLPKFNQPHTFVVVTLDPPIRKGLTLYPHIVLQFETDNVIEKTLSISE
DLLATRYKDRLEASYKGLIHEVFTLILRGLSGAKVTRPGKFRSCQGGYAVKSSLKAEDGI
LYPLEKGFFFLPRPPTLILHDEIDYVEFERHGAGGSSVSSHYFDLLVKLKNDQEHLFRNI
QRNEYHNLFDSINAKGLKIMNLGDGKATKGVASVFEDDDAVDPHLERIKKQAGGEDSDEE
DEDFVAEMDDGGSPTDDSGEEESDASESGEEKDKPVKKDSKKEPAAAKSSSSKKKSKDGD
EEGSKKRKQKKKKDPNAPKRAMSGFMFFSNTERENLKRSHPGMSFTEVGRALGERWKKMT
AEEKEPYESMAKADSKRYKEAMAGYKSGASAMNVDSDNGSDGE

NT seq 1932 nt +upstreamnt +downstreamnt
atggccgacggtcatctcttcaacaacatcctcctccggggccgcggcggaaacaaccca
gggcagttcagagtgcattcaggtggaattgcatggaagaagcttggaggtgggaaggtt
gttgaagtggagaaaactgatattgctgatgtaacctggatgaaagttcccaggacttat
cagttccgagttaggactaaggagggtttgttttacaaattcacaggtttccgtgagcag
gatgttagtaacttgaccaatttcatacaaaagtctatggggataactgcacaagagaag
caactctctgtcagtggacataactggggagaagttgatattagcggaaatgttcttacc
tttatggtaggttctaaacaagcatttgaagtatctttatcagacgttgcccagagtgaa
ttacaaggaaaaaatgatgtgtacttggaattccatgtggatgacactgctggagctaat
gagaaagattcattggtggatctgagctttcatattcctaactccaacacccagtatatt
ggtgatgagagtcgaaatgcagctcaggtttttttggacaaaatattgtctatggcagat
gttggatcaaatgatgaatcagttgtcacatttgaaggaattgcaattctcaccccaaga
gggcgatacaatgttgaacttcatctatcattcttgcggcttcaaggacaggctaatgat
ttcaagattcaatttagcagtgttgttcgtctcttcctactaccaaagttcaatcaacca
catacttttgttgttgttacgcttgatccacccatccggaaaggtttaactctgtatcca
catatcgtacttcagtttgaaacagataatgtaattgaaaaaacactatcaattagtgag
gatctcctggctaccagatataaggataggttggaggcatcatataaggggctaatacat
gaggttttcactttaatattgcgtggcctatccggagccaaagttaccagaccaggtaaa
ttccgtagttgtcaaggtggatatgcagtaaaatcatcattgaaagctgaagatggaatt
ttatatccacttgagaagggtttcttttttctaccaagacctcctactctcatacttcat
gatgagattgattatgttgagtttgaaaggcatggtgctggtggctccagtgtatcatct
cattactttgaccttcttgtaaaactgaaaaatgatcaagagcatctgtttaggaatatc
cagaggaatgaatatcataacctctttgactcaattaatgcaaagggtctcaaaattatg
aaccttggagatggaaaagctacaaagggtgttgcatctgtttttgaagacgatgatgct
gttgatccacatcttgaacggattaaaaaacaagcaggtggcgaggacagtgatgaagag
gatgaagattttgttgctgaaatggatgatggtggatctcctactgatgattctggagag
gaggagtctgatgctagtgaaagtggagaagaaaaagataagcctgtgaaaaaggattcg
aagaaagaacctgctgctgctaagtcctcttcatctaagaaaaagtcaaaggatggagat
gaagaaggttcgaagaagagaaaacaaaaaaagaaaaaagatcccaatgcaccaaagaga
gccatgtctggtttcatgtttttctcaaataccgaacgagagaatctaaagagaagtcat
ccaggaatgtcatttactgaggttggaagggctcttggtgagaggtggaagaagatgaca
gctgaggaaaaggagccatatgagtcaatggctaaagctgattcaaagcgctacaaggaa
gccatggctggttacaaaagcggggcgtcagcaatgaacgtagattctgataatggatca
gatggcgaatga

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