Typha angustifolia (narrow-leaf cattail): 140777197
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Entry
140777197 CDS
T11061
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tang01003
]
140777197
Enzymes [BR:
tang01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
140777197
Glycosyltransferases [BR:
tang01003
]
Polysaccharide
Structural polysaccharide
140777197
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
EF-hand_7
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
140777197
NCBI-ProteinID:
XP_072977246
LinkDB
All DBs
Position
15:complement(join(7395152..7395413,7395807..7395964,7396042..7396246,7396327..7396616,7396701..7396854,7396938..7397026,7397178..7397245,7402077..7402365))
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AA seq
504 aa
AA seq
DB search
MADEARARKLLPRRRLRRWILRVGTSALIWTVVMQLTSIAGVWQTRLPNSWPAASCFDRR
GRIVNNATADASNLSVLGEDGALRRAHSTPPVLLPRRVYRSNGYLQVSCNGGLNQMRAAI
CDMVTVARYLNLTLVIPELDKTSFWADPSDFGDIFNVNYFINSLRDEVKIVKKLPQKFSK
KIPFSMPPVSWSSEKYYLKQILPLVRKHKVLHFNKTDARLANNGLPVKLQKLRCRINYEA
IRFTPQIEALGNKLISILQRSGFFVVLHLRYEMDMLSFSGCTHGCSEGEIEELTRMRYAF
PWWKEKEIDSEMRRLEGLCPLTPEEITLVLKALGFRRDTLIYIASGEIYGGERRLAMLRA
AYPKIVRKEMLLSPDELRPFQNHSTQMAALDYLVSVSSDVFIPSYDGNMAKLVEGHRRYT
GFHKTILLDRRELVKVLDLLHDGKLSWDEFSTAVKEVHKNRMGQPIRRKVLPGRPKEEDY
FYANPQECLGPPRNTRTESRYSDI
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggcgagggctcggaagctcttgccgcggcgccgcctgcgccgctggatc
ttgcgggtggggactagcgcgctgatctggacggtggtgatgcagctgacgtcgattgcc
ggcgtctggcagacgcggctccccaactcgtggcccgcagcctcctgcttcgaccgccgc
ggacgcatcgtaaacaacgccaccgccgacgcaagcaacctctccgtcctcggcgaggac
ggcgctcttcggcgggcccactcgacgccgcccgtgctgctcccaaggagagtttacaga
agcaatggttatcttcaggtgtcatgcaatgggggcctgaatcaaatgcgagcagcgatt
tgtgatatggttactgttgcacgctatcttaatttgaccttagtaattcctgaacttgat
aaaacatctttctgggctgatccaagtgattttggggatatctttaatgtaaattacttc
ataaattcattgagagatgaagtgaaaattgtcaaaaagcttcctcagaaattcagtaag
aaaattccattctcaatgcctccagtcagttggtctagtgaaaaatattacttaaaacag
atcttacctcttgtaaggaagcacaaagtactccacttcaataaaacagatgcccgtctt
gcaaacaatggtctccccgttaagcttcaaaagcttcgttgtcgtattaactatgaggca
ataagatttactccacagatcgaggccctaggcaacaagcttatatcaatccttcaaaga
agtggattctttgttgtcctccacttgcgatatgagatggatatgctatctttttctggt
tgtacacatggatgttctgaaggcgaaattgaggaactcacaagaatgagatatgcattt
ccatggtggaaagagaaggaaattgattctgaaatgagaaggttggaaggactatgtccg
cttacacctgaggaaattacgttggtgctcaaagcactaggattcagaagggacactcta
atatacattgcctctggtgaaatatatggtggtgaaagaaggctggcaatgctgagggca
gcatatcctaaaatagtaagaaaggagatgcttctatctcctgatgaattgaggccattc
cagaaccattcaactcagatggcagcattggattatctggtttctgtttcaagtgatgtt
tttattcccagttatgatgggaatatggcaaaacttgttgaaggacaccgcaggtacaca
ggctttcataagaccatcctgttggataggagagaattggtgaaggttctggatcttctc
cacgatggtaaactatcgtgggatgagttctcaactgctgttaaagaggtacacaagaat
cgcatgggccagcctataagaaggaaagttcttcctggacggcctaaggaagaggattat
ttttatgccaatcctcaagaatgccttggccctccaaggaatacgagaactgaatcaaga
tactccgatatatga
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