KEGG   Typha angustifolia (narrow-leaf cattail): 140777347
Entry
140777347         CDS       T11061                                 
Name
(RefSeq) serine/threonine-protein kinase VPS15 isoform X1
  KO
K08333  phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:tang00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    140777347
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:tang01001]
    140777347
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tang04131]
    140777347
Enzymes [BR:tang01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     140777347
Protein kinases [BR:tang01001]
 Serine/threonine kinases: Other
  VPS15 family
   140777347
Membrane trafficking [BR:tang04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    140777347
 Autophagy
  Autophagosome formation proteins
   PI3K complex
    140777347
SSDB
Motif
Pfam: VPS15-like_hel Pkinase WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_THOC3 WDR55 WD40_CDC20-Fz Beta-prop_WDR3_2nd HEAT Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd PK_Tyr_Ser-Thr EIF3I Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th WD40_Gbeta Beta-prop_EML_2 NBCH_WD40 Beta-prop_WDR41 Beta-prop_CAF1B_HIR1 Beta-prop_IFT122_1st PEP5_VPS11_N HEAT_EZ Vac14_Fab1_bd Cohesin_HEAT DAP_DH_C APH
Other DBs
NCBI-GeneID: 140777347
NCBI-ProteinID: XP_072977494
LinkDB
Position
15:join(17142983..17143180,17143275..17143349,17144093..17144215,17145249..17145294,17145390..17145550,17146978..17147057,17148177..17148282,17149513..17149689,17149785..17152907,17153230..17153477,17153562..17153661,17154195..17154371)
AA seq 1537 aa
MGNKIARTTQVSASEYYLHDLPSSYNLVLIEVLDRGRFFKSIICKHDEGLVLVKVYFKRG
DNLDLKDYERRLVLIRDTFQSVQHPHVWPFQFWFETDKAAYLLRQYFFSSLHDRLSTRPF
LSLIEKKWLAFQLLCAVEQSHSKGVCHGDIKCENVFVTSWNWLYLADFASFKPTYIPHDD
PSDFSFFFDTGGRRRCYVAPERFYEHGSEAQVAPDAPLKPSMDIFSLGCVIAELFLEGQP
LFELSQILSYRRGQHDPSPSLEKIQDAGIRKMILHMIQLDPESRLSCESYLQSYAADAFP
SYFSPFLHKFFSCLVPLDSDTRVAVTQSAFRKIHEQMMIRDSAQGTSESCVVSGVSNTTS
EPQQSRKIINSPRASQEIKGELEKVKSGDQIQIVGDITSLLREVEQRNHHSSAKTTKETA
QNASQPLTYSRQHALNSFKGQKENKAPTLRKILKSDLNSLMSGYDSQWDTFDMPYFLGTE
CKMNCEGMVLIASLLCSCIRNVKQSQLRRAGLVLLKTASLYIDDEDRLQHVVPYVIVMLS
DPSAIVRCAALETLGDILPLVRDFPPSDAMIFPEYILPMLSTLPDDPEESVRICYASNIF
KIALTAYRFLIHSHSLSDAVSLDKSDLALKSQSVATESPKDRHHDKSDNQLSQLRKSISE
IVQELVMGPKQTPNIRRALLQDIGYLCYFFGHRQSNDFLLPILPAFLNDRDEQLRAVFYG
QIVYVCYFVGQRSVEEYLLPYIEQALSDDMEAVIVNALDCLSMLCKSGFLRKGILLGLIE
KAFPMLCYPIQWVRKSAVAFIASSSESLGPVDSYVYLSPVLRPFFHSEPPSLSCETTLLS
CLKPPVSKLVFYKVLENARSSDMLERQRKIWYNSSAYSNQWETIEHTKRVAGDVRSAVSK
ESNAQGGRYAGRAMQNTYLPVLEDVAKLRVVNSSHNASVDIRDSLSSDKLQFSGFISPHV
TAGNNSFCDGVSEGIPLYSLCIDKRAAGAVSVGYDTSLHWNTKGVTSSCMPWLEPVNKPL
GLSSSVPPKLVSGSFFNINTNVKSLQTSVQDAEGNETNQSAHITRRFQDVAIYDNMKGSS
SITGDDASQSDATGLPFSIGSSVPDTGWKPRGVLVAHLQEHRSAVNDIAISNDDAFFVSA
SDDSSVKIWDTRKFERDIAFRSRLTYTLGGSRALCTTMLRGTAQVVVGASDGTVHLFSVD
YVSRGLGNVIERYSGITDVKKKEVGEGAILSMLNCSTSDNCISQTVLFSTQGCGIHLWDT
RVNSEAWTFKSAPEEGYISSLVMGQCGNWFVSGSSRGVLTLWDLRFLLPVNSWQYSMVCP
VEKMCLLIPPSNSTSFISRPLVYVAAGYNEVSLWNAENGSCHQVFRTPSSENETEVSNVP
RALARPSSKSNSKQDVKRTNNSKYRIDELNEHSPRFPGTRSLLPLPGGNLLTGGTDLKIR
YWDHTSPDRSYCVCGPSTKGIGNDEFFDIRSSFGVQVVQEMNTRATSAKLTQKALLAAAA
TDSASCHRDSVLSLASFKLNQRMLVSSSRDGAVKVWK
NT seq 4614 nt   +upstreamnt  +downstreamnt
atggggaacaagatcgcgaggacgacgcaggtctcggcgtcggagtactatctccatgac
ctgccctcgtcgtacaaccttgtgctcatcgaggtgctcgatcggggccgcttctttaaa
tccatcatctgcaagcacgacgaaggcctcgtgcttgtcaaggtctacttcaagcgcggg
gataatctcgacctcaaggattatgagaggaggttggttctgatcagggacacattccaa
agtgttcaacatccccatgtttggccgttccagttttggtttgagacggataaggcagca
tatctgttgaggcaatatttcttcagcagtcttcatgatcgactgagcacgcggcccttc
ctcagtcttattgaaaagaagtggctagcttttcagttactctgtgcggtggagcaaagc
cacagtaagggagtttgtcatggtgacatcaaatgtgagaatgttttcgtcacctcttgg
aattggctataccttgcagactttgcatcttttaaaccaacatacataccacatgatgat
ccatcggacttctcattcttctttgacactggaggaaggcggagatgttatgttgcacct
gaacgattctacgagcatggaagtgaagcccaagttgcaccagatgcacctttaaagcca
tctatggacatattctctcttgggtgcgttattgctgagctttttcttgagggacaacca
ctttttgagctgtctcagattctttcttatcgccgaggacaacacgatcccagtccaagc
ctagaaaagatacaagatgctggaattcggaaaatgatacttcatatgattcaactggac
ccagagtcaaggttgtcatgcgaaagttatttgcaaagttatgcagcagatgcatttcca
agttatttctcaccgtttcttcataaattcttttcctgcttggttcctcttgactcagat
acaagggttgcagtgacccagagcgctttcaggaagatacatgaacaaatgatgataaga
gattcagctcagggaacatctgaatcttgcgtagtttctggagtcagtaatactacctct
gaaccgcaacaaagtaggaaaatcataaactcaccaagggcctctcaagagatcaaaggt
gagttagagaaagtaaaatctggcgatcagattcagattgttggagatattacttctctt
ctaagagaagtagaacaaagaaaccatcattcaagtgcaaagacaacaaaggaaactgct
caaaatgcttcacagccattaacttactcaaggcagcatgctttaaacagtttcaagggt
caaaaggaaaataaagcacccactttgagaaaaatcctaaaaagcgacttgaattcttta
atgtctggatatgatagtcagtgggacacatttgacatgccttattttctaggaaccgaa
tgtaagatgaattgcgaaggcatggtattgattgcatcactactctgctcatgtatacga
aatgtcaagcagtcacagttgagaagggctggtctagttctgcttaagactgcttcgcta
tatattgatgatgaagaccggttgcagcatgtagttccctatgtaattgtaatgctttct
gatccatctgcaattgtccgttgtgctgctttggaaacattaggtgacattttgcctctt
gtcagggactttcctcctagtgatgcaatgatatttcccgagtatattcttccaatgcta
tctactcttcctgatgatccagaggaaagtgttaggatttgctatgctagcaacatcttt
aagattgctctgactgcttacagattcttgattcactctcacagcttatctgatgcagta
tctcttgataaatcagatcttgctcttaaatcacaatctgttgctacagaatcaccaaaa
gataggcatcatgataaaagtgacaatcagctttcacaattgaggaaatccatatctgaa
attgtgcaagaattagttatggggccaaagcaaactccaaatatccgcagagctcttttg
caggatatcggttatttgtgctacttctttggtcacaggcaaagtaatgattttttgcta
cccatccttcctgcatttcttaatgatcgagatgagcagctacgggcagttttctatggt
caaatagtttacgtctgttactttgttggtcaaagaagtgtcgaggaatatcttttacct
tatatcgagcaggccttaagtgatgacatggaagccgtcattgttaatgcgctggattgc
ttgtccatgctttgtaaaagtggttttttgaggaaagggatacttcttggcttgattgag
aaagcctttcccatgttatgttatccaatccaatgggtaagaaagtcagctgtcgccttt
attgcttctagtagtgagagcttaggcccagtagattcatatgtgtacctttccccagtt
ctgcgcccattctttcatagtgaaccaccttctctatcttgtgagacaactctcctttct
tgccttaagcctccagtctcaaaattggttttctataaagttctagagaatgcaaggagt
tctgacatgttggaaagacagagaaagatatggtataattcatcagcctactcaaatcag
tgggaaactattgaacacaccaagagagttgcaggagatgtgagaagtgctgttagtaaa
gaatccaatgctcaaggtggaagatacgccggtagagcaatgcaaaacacttatctacca
gttcttgaagatgtcgcaaaactgagagttgttaattcttcccataatgcatcagttgac
attagagattcactctcttctgacaagttgcaattttctggcttcatttcaccacatgtc
actgctggtaataattccttctgtgatggagtatctgaaggaatacccttgtactctctt
tgcatagataaacgtgcagctggagctgtttctgtaggatatgatacttcattacactgg
aatactaagggagttacatcgtcatgcatgccttggttggaacctgtcaataagccttta
ggtttatctagttctgttccacccaaacttgtttcaggttcttttttcaatatcaacacc
aatgtcaagtcattgcaaacatcagtgcaggatgcagagggtaatgaaactaatcagtct
gcacatattaccagaagatttcaggatgttgctatttatgacaacatgaagggcagctca
tcaataactggagatgatgcgtcacaatctgatgcaactggattgcccttcagcatagga
tcatcagttccagatacaggatggaagcctcgtggagtgctcgtggcacatctgcaagag
catcgttctgcagtcaatgacatagccatatcaaatgatgacgccttctttgtgagtgct
tctgatgactccagtgttaagatttgggataccagaaagtttgaaagggacattgccttc
agatcgaggctgacttatactctaggaggcagtcgggctttatgcacaactatgcttcgt
ggtactgcacaggtagttgttggtgcaagtgatgggacagtgcacttgttttctgttgat
tatgtatctagaggtctgggaaatgtcattgaaaggtattctggtattactgatgtcaag
aagaaggaagttggggaaggtgcaattcttagcatgttaaactgttctactagtgataat
tgtattagtcagacagttctttttagcacccaaggttgtgggattcatctttgggataca
agggttaattcagaagcttggacgtttaaatctgcacctgaagagggatacatctcttct
cttgtaatgggtcaatgtgggaattggtttgtatcaggatcttcaaggggtgtgcttact
ttgtgggatctaaggttccttttgcctgtgaattcatggcagtattctatggtatgccct
gtggagaagatgtgcttgctaattccaccatcgaactccacatcttttatttcacgacct
ttagtttacgttgcagctggctataatgaagtttcactctggaatgcggagaatggaagc
tgccaccaggtattcagaacaccaagcagtgaaaatgaaactgaagtttccaatgtcccc
agagcattggcaaggccttctagcaagtcaaattctaagcaagatgtgaaacgaactaat
aattctaaatatagaattgacgaattgaatgagcattcacctcggtttccaggtacacgg
tcgttgcttcccttgcctgggggaaacttgttgaccgggggcactgacttgaagatacgc
tactgggatcacaccagtcctgatcggagttactgtgtctgcggtccttcaacaaaagga
attggaaacgatgaattttttgacataaggtctagtttcggtgtacaagttgtgcaggaa
atgaacaccagagccacatccgccaaattgactcagaaagctctacttgccgcggcagcc
actgattccgccagttgccaccgtgattctgtcctctcactggcgtctttcaaattaaac
caaaggatgttggtatccagcagtagagatggtgctgttaaggtgtggaaatag

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