Typha angustifolia (narrow-leaf cattail): 140777410
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Entry
140777410 CDS
T11061
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A-like
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tang04121
]
140777410
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140777410
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140777410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
RING_XB3-XBAT31
DUF4302
zf-Nse
Motif
Other DBs
NCBI-GeneID:
140777410
NCBI-ProteinID:
XP_072977597
LinkDB
All DBs
Position
15:complement(join(34090..34399,34494..34601,34704..35086,35176..35284,35377..35439,37598..37644,37759..37872))
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AA seq
377 aa
AA seq
DB search
MESHLSSAAAFVEGGIQDACEDACSICLEAFCESDPSTVTSCKHEFHLQCILEWCQRSSQ
CPMCWQSISLKDPTSQELLEAVERERVIRYNQSRNTTIFHHPTLGDFELQQLPVGGNDAE
FEERIIQHLAAAATMGRAHNFARREGYRGRLGAHGRPQFLVLSTHQSAPSIGSVSASSGE
RGEVQPDSVVVAVSQSPTASGEEATNRGPRVIPTQADQVAALSSGSSYSASSPGLPSDQT
SAGQSTSVIQDRAGPSDIQSFSESLKSRLNAVSMRCKESITKSTHGWKERLFSRNTSVAD
LGSEVRREVNAGIASVSSMLERLDTRQNRRISGSAVEVTSDHSATELSNERATGNNSSTH
QNNSNPSASCVATSSLN
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggagagccatctatcgtcggctgcggctttcgtggaagggggcatccaggatgcctgt
gaggatgcatgcagcatttgtcttgaagccttctgcgaaagtgatccgtcaacagtgact
agctgcaagcatgagtttcatcttcaatgtattcttgaatggtgccagagaagttctcaa
tgcccaatgtgctggcagtctatcagtttgaaggatccaaccagccaagaactacttgaa
gctgtagaacgagagagagttatcaggtataatcaatcacgaaacaccacaatatttcac
catcctacacttggagatttcgaattacaacagttaccagttggaggaaatgatgctgaa
tttgaagagcgtattattcagcacttagctgctgctgctacgatgggaagagcacacaac
tttgctagaagagaaggatatcggggtaggttaggagctcacggccgtccacagttcttg
gttttgtctacacatcaaagtgcaccttctattggctctgtttctgcttcttctggggaa
agaggggaggtccaaccagattccgttgttgtagctgttagtcagtcgcctactgcttca
ggagaggaagccacaaaccgaggcccacgggtaattccaactcaagccgatcaagttgct
gcattatcatctgggagtagctactctgccagcagtcctggacttcctagtgaccagact
tctgctggacaatcgacttcagttatccaagatagagctggaccatcagatatccaatcc
ttttcggaatctttgaagtctcgcctaaatgctgtctcaatgaggtgcaaagagtctatt
acgaagagtactcatggatggaaggagaggttgttttcacgtaacacatccgttgcagat
cttggttctgaagttagaagagaagttaatgctggaattgcttctgtttcgagcatgctg
gagcgtttggacaccagacaaaatagaagaataagtgggtcagccgtagaagtcacctca
gatcattcagctacggaattaagtaatgagagggctacagggaataattctagcactcat
caaaataacagcaacccatcagcttcctgtgttgcaacttcaagtttaaattaa
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