KEGG   Typha angustifolia (narrow-leaf cattail): 140777436
Entry
140777436         CDS       T11061                                 
Name
(RefSeq) la-related protein 1A-like
  KO
K18757  la-related protein 1
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tang03019]
    140777436
Messenger RNA biogenesis [BR:tang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     140777436
SSDB
Motif
Pfam: LARP1_HEAT La BCAS3
Other DBs
NCBI-GeneID: 140777436
NCBI-ProteinID: XP_072977648
LinkDB
Position
15:complement(join(7291942..7292092,7292687..7292791,7292928..7293073,7293559..7293622,7293741..7293884,7293987..7294330,7294529..7294633,7296351..7296420,7297105..7297307,7297535..7297723,7297867..7297938,7298064..7298154,7298483..7298636,7298726..7299278,7300856..7301188))
AA seq 907 aa
MTMERNTAEPEESGGGGDLTVAVDLAGGGGKSSPWRRPTAAAAEKEEGRRVEGSVMGWES
WPALEDARQKGSAGAAAKLAPAVTPQPMAMGNAGPVKKNRTTPHPPARPAQGTTDQCKSD
GFGNGNPLNKHHQAHPRKHGPINGTVANGPFPLTLPYHQYPGQPMLYPVIQPPPFMVHEY
PYQTCPLPFSTNDILGANSGHETPMASFVQIGQPGGKDRKVSSPQLPRGDPKIWRPSAGT
YGSRFHTDQTLGNQRAFDPRNNAKMPHGVGLRAFIRPVHQFFGPAPGFINGPPFPGPPMH
YVPAAPMEMMRGPRFVSHHPPPTYPVMTPELVALKTRIVNQIEYYFSDQNLQQDNYLRSL
LDEQGWVSISKIADFPRMKRMTNDIPLILDALRSSSLIEIQENKIRRRNDWCKWIPVSTK
SGSVHSQSSVGIDNCTSGGNNSGTSNEKIICQTTCKDQDEHLPSEIAALAISDDLELEAV
KEQQSSRSDVQNIGAVIESPKYNMDQSTFMLDEELELELASVKKDHLCLNERFDEEEDEM
DVIDQDMHKLIVVTQDIMIEKDDQTNSRESGSISTEVASAINDGLYFYEQELRSKYSNIE
RNNCGTEMRDKISKPFTVANPFVSSENNTVFAVNNDGCEETAQAVSRRRQNKCNSKMHAI
QKQRLFPSNFRSHNNGHNCHGIVSESPPSNSVGFFFGSTPPENYGIISSKLGGSPNGTLS
GSSPPVGSMLKPFPPFHNPSHQLLEENKFKQQKYLKFHKRCLNDRKKLGIGCSQEMNTLY
HFWSYFLRFMFNKSMYNEFRKLALEDAAANYNYGLECLFRFYSYGLEKKFKQKLYEDFEQ
LTLEFYHKGNIYGLEKYWAFHHFREMRDTYKPLQKHPELERLLREEYRSLEDFQNKGKDG
QGCRERE
NT seq 2724 nt   +upstreamnt  +downstreamnt
atgacgatggagagaaatacggcggagccggaggaatctggcggcggaggagatttgacg
gtggcggtggatctcgctggcggcgggggtaagtcgtctccgtggcggcggccgacggcg
gcggcggcggagaaggaagagggaaggagggtggagggatcagtgatggggtgggagtcg
tggccggcgctcgaagatgcgaggcagaagggttcggccggtgccgcggcgaagctggca
ccggcagtgacgccgcaaccgatggcgatgggaaatgctgggccagttaagaagaaccgg
acgacgcctcatcctccggctcgtcctgcgcagggaactactgaccagtgcaagtctgat
ggttttgggaatggtaatcctcttaataagcatcatcaagcacatcctcgtaaacatggc
ccaataaatggtactgtcgcaaatggcccatttcctttaactttgccgtatcaccaatat
cctgggcaaccaatgttataccctgtaatacaacctccacctttcatggttcatgaatat
ccctatcagacttgccccttaccattttcaaccaatgacatccttggtgcaaattctggg
catgaaacccccatggcatcttttgttcaaataggtcaacccggaggaaaagatagaaaa
gtaagttcaccacaactaccacgaggagatccaaaaatttggcgccctagtgctggcact
tatggtagtagatttcatactgatcaaacattgggcaaccaacgggcatttgatcctaga
aacaatgcaaagatgcctcatggtgtcggactcagggctttcatcaggccagtacatcag
ttttttggtccggctcctgggttcattaatgggcctccatttcctggtcctcctatgcat
tatgtgcctgctgctcctatggaaatgatgaggggccctcgttttgtgtcacatcatccc
ccacctacttatccagttatgacacctgagcttgtagcattgaaaactaggatagtaaat
caaatcgagtattatttcagcgaccaaaatctacagcaggacaattatttgagatcatta
ctggatgaacaaggatgggtttcaatatctaaaattgcagattttcctagaatgaagaga
atgacgaatgatatacctctgattcttgatgccttacggagttcaagtttaatagagatt
caggagaacaagataaggagacgtaacgactggtgcaagtggattccagtttctacaaaa
tctggttctgtgcacagccaatcttctgtcggcattgataattgtacaagtggaggaaac
aatagtggcacctctaatgagaagattatttgtcagaccacctgtaaagaccaagatgag
catttgccatcggaaattgctgctcttgccataagtgatgatctagaacttgaagcagtg
aaagaacaacagagtagtagatctgatgtgcaaaacataggagctgtaatcgagtccccc
aaatataatatggatcaaagcactttcatgctggatgaagaactggaattagaactggca
tctgttaagaaagatcacctctgtttaaatgaaaggtttgatgaagaggaagatgaaatg
gatgtcatcgaccaagatatgcataaactaatagtcgtgacccaagatatcatgatagaa
aaagatgatcaaacaaactcaagggaatcaggatctatttccactgaggttgcatctgct
atcaatgatggcttgtacttttatgagcaggagttgcgatccaaatactctaatattgaa
agaaataattgtggaacagagatgagggataaaatttctaaaccgtttactgtagcaaac
ccctttgtgagctccgagaataacacagtatttgctgtaaataatgatggctgtgaagag
actgcacaagctgtttctagaaggcgacaaaataaatgcaacagcaagatgcatgccata
caaaaacagcgtctgtttccaagtaactttagaagtcataacaatggccataattgtcat
ggcattgtatcagaaagtcccccaagcaactcagttggttttttctttgggtcgactccg
cctgaaaattatggtattatatcttcgaagttgggcggttctcctaatggtactctttca
gggagcagcccacctgtgggatcaatgctaaaaccttttccaccatttcataatccaagc
catcagcttttagaggaaaataaatttaagcagcagaagtacctgaagtttcacaagcga
tgtctcaatgaccgcaaaaaattaggaattggttgcagtcaggaaatgaacacattatat
catttttggtcatacttcctgagattcatgtttaacaaatctatgtacaatgagttccgt
aagctggcactagaagatgcagcagctaactacaactatggacttgagtgtctcttcaga
ttttacagttatgggttagagaaaaaatttaaacaaaaattatatgaagatttcgagcag
cttacgctggagttctaccataagggcaatatttatggccttgagaaatactgggcattt
catcattttcgagagatgcgggacacctataaacctctacagaagcatccggagttagaa
aggctacttagggaagagtatcgaagcttggaggatttccagaacaaaggaaaagatgga
caaggctgcagagaaagagaatag

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