KEGG   Typha angustifolia (narrow-leaf cattail): 140777696
Entry
140777696         CDS       T11061                                 
Name
(RefSeq) coatomer subunit beta'-1-like isoform X1
  KO
K17302  coatomer subunit beta'
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tang04131]
    140777696
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tang04147]
    140777696
Membrane trafficking [BR:tang04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    140777696
Exosome [BR:tang04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   140777696
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SCAP ANAPC4_WD40 Beta-prop_IFT140_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_DCAF4 Beta-prop_WDR75_2nd WD40_RFWD3 WD40_like Beta-prop_WDR35_TULP_N WD_LRWD1 TPR_GEMI5
Other DBs
NCBI-GeneID: 140777696
NCBI-ProteinID: XP_072978084
LinkDB
Position
15:complement(join(15912543..15912698,15913321..15913453,15915926..15916032,15916258..15916351,15916466..15916662,15917186..15917257,15917380..15917494,15917968..15918084,15918172..15918263,15918362..15918538,15918651..15918725,15918826..15918966,15919670..15919858,15920453..15920518,15920594..15920744,15921070..15921138,15923471..15923619,15923699..15923830,15923924..15924249,15924321..15924357,15926491..15926545,15926742..15926803,15926917..15926937,15927184..15927186))
AA seq 911 aa
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGSVCIWNYQTQTMVKSFEVTELPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWDKGWICTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDRPYLITGSDDQTAKVWDYQTKSCVQTLEGHSHNVSAVCFHPE
LPIIMTGSEDGTVRIWHATTYRLENTLNYGLERVWAVGYIKGSRRVVIGYDEGTIMIKIG
REEPVASMDSSGKIIWAKHNEIQTVNIKAVGADVEVTDGERLPLAVKELGSCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAIRESTSRVKIYSKTFQ
EKKSVRPTFSAERIFGGILLAICSNDFICFYDWVECRLIRRIDVNVKNLYWADSGDLVAI
ASDTSFYILKYNRDVVSSYLEGGKPVDEQGVEDAFELLHEINERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVIGYTLLLSLIEYKTLVM
RGDLERANDVLPTIPQEHHNSVAHFLESRGMLEDALEIATDPDYRFDLAVQLGRLEVAKA
IAIEVQSESKWKQLGELAMSTGKLGMAEECLSHAMDLSGLLLLYSALGDAEGITKLSSLA
KEQGKNNVAFLCLFMLGKLEDCLQLLVDSNRIPEAALMARSYLPSKVPEIVEIWKNDLNK
VNPKAAESLADPGEYPNLFEDWQIALAVENNLAHKRGNYLPAEQYLSYAEKTNVTLVEAF
KVMQISEEDLPVENGEYDDEIMEENGTQEGEEEEEEAVEVDADDSTDGAILVNGHEGEEQ
WGTNNEGTPSA
NT seq 2736 nt   +upstreamnt  +downstreamnt
atgcctctcagattagaaatcaagaggaaactcgcccaaagatcagaaagagtaaaatca
gtagatctgcatccaaccgaaccatggattctggcgagtctttattctggaagtgtctgc
atctggaactaccaaacgcagactatggtgaaatcatttgaagtcactgaattaccagtg
aggtcggcaaaatttattgcacgcaaacaatgggttgtggctggtgctgatgatatgttc
attcgtgtgtacaattataatacaatggacaaagttaaagtttttgaggcccataccgat
tacatcaggtgtgtggctgttcatccaactcttccatatgttctgtcatcatctgatgac
atgttgataaagctttgggactgggataagggttggatatgtacgcaaatttttgagggg
cattctcactatgtgatgcaagttacttttaatccaaaagacaccaatacttttgcaagc
gcctcacttgatcgcacaataaagatctggaatcttggttcaccggatccaaattttacg
ctagatgcacatttgaagggtgtgaattgtgttgattattttactggtggtgataggcca
tatttgattactggttctgatgatcaaactgcaaaggtctgggactaccaaactaagagc
tgtgtccaaacacttgaaggccattcacataatgtttcagctgtctgtttccatcctgag
cttcccataataatgacaggttcagaagatggaacagttcgcatatggcatgcaactact
tacaggctcgagaacacacttaattatggccttgaacgagtttgggctgtcggatacatt
aaaggttcaagaagggtggtaattgggtacgatgaagggaccatcatgataaaaattggc
cgtgaagaaccagttgctagcatggatagcagtggaaaaattatttgggcaaagcataat
gagattcaaactgtgaatatcaaggcagttggtgcagatgtcgaggtcacagatggagaa
agattgccattggctgtgaaggagttgggaagctgtgatctttacccacaaagtttaaag
cataacccaaatgggcgatttgttgttgtttgtggagatggagaatacatcatatatact
gctttggcatggcgaaatagatcttttggatctgcattggaatttgtttggtcatccgat
ggagagtatgcgatcagggaaagtacatccagagtaaagatttatagtaaaacattccag
gagaagaaaagtgtccggccaaccttttctgcagagcgtatctttggtggaatattattg
gcaatctgctccaatgacttcatttgcttttacgactgggttgagtgcagattaatacgt
cgaattgatgtgaatgttaaaaatctttattgggctgatagtggtgacttagtggcaatt
gcaagtgatacatcattctacatcctaaagtacaatagagatgttgtttcttcttatctt
gaagggggaaagccagtggatgagcaaggtgttgaggatgcctttgagctgcttcatgag
atcaatgagcgtgttcggactgggatatgggttggggactgtttcatttataataactct
tcatggagacttaattattgtgttggtggagaggtcacgacgatgtttcacttggatcgg
cctatgtatttattaggataccttgctagccaaagtcgagtttatcttatagacaaagag
tttaatgttatcggttacacattactcctcagtttgatcgagtataaaactcttgtaatg
cgtggggatctggaacgtgcaaatgatgttttgccgacaataccacaagaacatcataat
agtgtggctcatttcttggagtcccgaggtatgctagaggatgctcttgaaatagctact
gatcctgattacagatttgacctagctgtacagcttggtagattagaggttgccaaggca
attgctattgaagtacaaagtgaatctaagtggaagcagttgggagaattggcgatgtcc
actggaaagttaggaatggcagaggagtgcttatcacatgctatggatttgagtggctta
ttacttctgtactcagctcttggagatgctgaagggataacaaaactttcatcccttgct
aaagagcaagggaagaacaatgttgctttcctttgtctctttatgctaggtaaattggaa
gattgccttcagttgctggttgatagtaatcgcattccagaagctgcattgatggcacga
tcttatcttccaagcaaagttccagagattgtagaaatttggaaaaatgatctcaataaa
gtcaatccaaaagctgcagagtctttggctgatcctggcgagtatcctaatttatttgag
gactggcagatagctcttgctgttgaaaataatcttgcccacaaaaggggtaattatcta
cctgctgaacagtacttaagctacgctgaaaagacaaatgtaactcttgtggaagctttc
aaagtgatgcaaatttctgaagaggatttacctgttgaaaatggagagtatgatgatgag
ataatggaagagaatggaacacaagaaggtgaagaagaagaagaggaagccgttgaagtc
gacgctgatgattctaccgatggtgccatccttgtcaatgggcatgagggtgaggaacag
tggggtacgaacaatgaaggaactccatcagcctaa

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