Typha angustifolia (narrow-leaf cattail): 140777716
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Entry
140777716 CDS
T11061
Name
(RefSeq) tRNase Z TRZ2, chloroplastic
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tang03016
]
140777716
Enzymes [BR:
tang01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
140777716
Transfer RNA biogenesis [BR:
tang03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
140777716
Prokaryotic type
140777716
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
T3SS_basalb_I
Motif
Other DBs
NCBI-GeneID:
140777716
NCBI-ProteinID:
XP_072978129
LinkDB
All DBs
Position
15:complement(join(22966688..22966777,22966848..22966922,22967144..22967212,22967501..22967614,22967714..22967809,22967931..22968001,22968150..22968312,22968877..22969257))
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AA seq
352 aa
AA seq
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MPISATLSSSPITLPSLLPFDPPNTISPRNLSLSGGRQFRTLAVNKPGLLSVLDRAMEEE
EYRKARAEVRRKGVDVEGYLIEGLSVGGHETCVLVPSLNSAFDIGRCPARAVHQDFLFIT
HAHLDHIGGLPMYLATRGLYNLKPATVFVPPCIKEDVEKLLQIHRTMSQVELEVDLIALD
VGETYEIRNDLVVRPFRTHHVIPSQGYVIYSVRNKLKKQYAHLKGIQIKKLKLSGVEITD
TILYPEVAFTGDTTSDFILEPRNADALRAKLLITEATFLDEENDIKHAREHGHMHLFEIM
ENAQWFRNKTILLTHFSSRYSIEDIRQAVSKLQPKLSSKVVALTEGFRSEYT
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgccgatatccgccaccctttcctcctcccctatcactctcccttctctcctcccgttc
gatcctccgaacaccatctctccccggaatctttcgttatcaggcggccgccaattccga
actcttgccgtgaataagccggggctcttgtctgtgcttgaccgggcaatggaggaggag
gagtaccggaaggcgagggcggaggtgcggcgcaagggcgtcgacgtcgaggggtacctt
attgaggggttgtcggtgggcggacacgagacgtgcgtcttggttcctagcctcaactcc
gccttcgacattggccggtgtccggcgagggccgtgcaccaagatttcctcttcatcacc
cacgcgcatcttgaccacattggcggccttccgatgtacctagctactcgtggtctgtac
aatttaaagccagcaacagtttttgtgccaccatgcatcaaagaggacgtggagaagctg
cttcaaattcatcggaccatgagtcaagtcgaattggaagttgacttaattgcattggat
gttggagagacgtatgaaatacgtaatgaccttgttgtcagaccattcagaactcaccat
gttatacccagccagggatatgtcatttactcagtcagaaacaagctgaagaaacaatat
gctcacttaaagggcattcaaatcaagaaattgaagctttcaggtgttgagattacagac
accatattatatccagaggttgcctttacaggagacacaacgtctgattttattctcgag
ccacgaaatgcagatgccctcagagcaaagcttcttataaccgaggcaactttcctagat
gaagaaaatgatatcaaacatgctcgggagcatggtcacatgcatttattcgagattatg
gagaatgcccagtggttccgaaacaagaccatcttactcacccacttctcatcaagatac
agtattgaggatatccgccaggcagtgtctaagctacaacctaagttatcttctaaggtg
gtcgctctcacagaaggcttcagatcagagtacacctag
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