Typha angustifolia (narrow-leaf cattail): 140777749
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Entry
140777749 CDS
T11061
Name
(RefSeq) vacuolar protein sorting-associated protein 26A-like
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04142
Lysosome biogenesis
tang04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140777749
04142 Lysosome biogenesis
140777749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140777749
Membrane trafficking [BR:
tang04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Retromer subcomplex
140777749
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps26
Arrestin_N
Motif
Other DBs
NCBI-GeneID:
140777749
NCBI-ProteinID:
XP_072978184
LinkDB
All DBs
Position
15:complement(join(23370777..23370964,23373306..23373481,23373573..23373628,23374803..23374847,23375651..23375717,23376435..23376546,23377569..23377613,23384032..23384104,23384182..23384256,23384913..23384987,23389338..23389340))
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AA seq
304 aa
AA seq
DB search
MNYIIGAFKPPCIISITFSDGKDRKQASIKKDNGQIAMVPVFQSLENIAGEVSLEPIQGK
KVEHTGVKIELLGQIELYFDRGNFYDFTSLVRELDVPGEIYERKTYPFEFSSIEMPYESY
NGTNVRLRYILKVTISRNYASNIVELRDFCVRNYTPTPTINNSIKMEVGIEDCLHIEFEY
NKSKYHLKDVIIGKIYFLLVRIKIKNMELEIRRRESTGSGPNTYVETETLAKFELMDGAP
VRGESIPIRLFLSPYELTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITIFRLLET
TPAS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaattatattattggagcatttaagccaccatgtatcatttcaataacgttttctgat
ggaaaagatcgcaagcaggcttccataaagaaggataatggccaaatagcaatggtccca
gtgttccagagtcttgaaaacatagctggagaggtctctttagaacctatccaagggaaa
aaggttgagcacactggtgtcaagatcgagctacttggtcagatagagttgtattttgat
agaggtaacttctatgacttcacatccctagtgcgggaattagatgttcctggtgaaatt
tatgaaagaaaaacatatccatttgaattctcttccattgaaatgccatacgagtcatat
aatgggacaaacgtgagattgaggtacattctaaaggtaacgatcagtaggaattatgcc
agcaatattgtggaacttcgggacttctgcgtgcggaactacactcctactccaacaatt
aacaacagcataaagatggaagttggaatagaagattgcctacacattgagtttgaatac
aacaaaagcaagtatcatctcaaggatgttatcattggaaagatctattttcttctggta
agaattaaaataaaaaatatggagcttgagattagacgccgggagtcgactggatcaggg
cctaatacatatgttgagactgaaacactagcaaagtttgagttgatggatggtgctcct
gtcagaggagaatcaattccaataagattgtttttgagcccgtatgagttgactccaaca
tatcgcaatattaataacaagttcagtgttaagtattacctcaatcttgtccttgtggac
gaggaagaccgtcggtactttaagcagcaagaaattacaatattccgccttctagaaact
acaccagcttcatag
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