Typha angustifolia (narrow-leaf cattail): 140777921
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Entry
140777921 CDS
T11061
Name
(RefSeq) uncharacterized protein
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tang04121
]
140777921
Enzymes [BR:
tang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140777921
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140777921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
140777921
NCBI-ProteinID:
XP_072978448
LinkDB
All DBs
Position
15:join(6255007..6255174,6256051..6256356,6258707..6258915,6258992..6259040,6259197..6259286,6259372..6259434,6259600..6261312)
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AA seq
865 aa
AA seq
DB search
MDDSCAVCAETLEWVAYGSCGHREVCSTCVARLRFVLDDRRCCICKTECPTVFVTKALGD
YTRVISDFSVFPAGANEGQVGSHWYHEDTQAYIDDVDHYKMIRAMCRLSCSVCDNSTEEQ
GSGAPKRRSRFRSIEQLKGHLFHQHRLFMCSLCLEGRKVFICEQKLYNRSQLTQHISTGD
SEVDGTESERGGFAGHPMCEFCKNPFYGDNELYMHMSTEHFTCHLCQRQHPGQYDYYRNY
DDLEMHFRQEHFLCEDEACLAKKFIVFQSEAEMKRHNAIEHGGNMSRSKRNAALQIPTSF
RYRRTEQEHRRGRGRGFRPDTSSNQLAMAIEASLETAMANGRVRDSSSTARAIESGEVNQ
RDIVTGSLDSLNINSGSEAPSRSLATQNQSSRSATILEESSFPPLLDREIPEPSARYAQA
LTQNSRSASRLGEDSFPPLPGANKKNKPKVQQGLEGLAKNTLAARLQQRSKGSITINSAR
SRPSVNHKLVPSSSGTSSQIWPTPNQGLPSSSNSQHRVIQPARENGFVSPPSANTAWSAS
SSNRMRHSASAPNLIEKGSSNQAAANTASIASRSQVLPTSRQSAPNVEDVRTANKSLVER
IRAALGMDEDRYTTFKSISAEYRQGQINTWEYLSYVEQFGLSHLILELARLLPDVNRQKE
LTDAYHANLRFKDLQQNAGSSPGRSREGNPKKKGKGKVVHNAETSTPKDALTDNILETVR
KLQSGYKPQEGNVEVLSKDGYRAAKEKLQISAGESHSNPSSLSINTAGPSGNRERESLLD
GTGANQNLGFEGSSKQRKKTAKFLRVRLGDGSAAALLDLGRPNASPEQLEQESANNPSEG
LPIRGVWRNGGGQRLFSNTQRNPSN
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagctgtgcggtgtgcgcggagaccctggagtgggtcgcctacggctcttgc
ggtcaccgtgaggtgtgctcgacctgcgtcgcccgcctccggttcgtcctcgacgaccgc
cgctgctgcatctgcaagaccgagtgccccaccgtgttcgtcaccaaggccttgggggat
tacacgagggtgatatctgatttttcagttttccctgctggtgccaacgaagggcaggtc
gggtcacactggtatcatgaggatacgcaggcatacattgatgatgtagaccattacaag
atgataagggcaatgtgccggctttcttgtagtgtctgtgacaatagcactgaggagcaa
ggaagcggagcccccaagaggaggagcagattcaggagtattgagcagctgaagggtcat
ctcttccatcagcataggttgttcatgtgcagcctttgcttggaagggaggaaggtattt
atttgtgagcaaaagctttataatagatcacaactaactcaacacataagcaccggtgat
tcagaggtggatggcactgagagtgaacgtggtggatttgccgggcatccaatgtgcgag
ttctgcaaaaacccattttatggggataatgaactctacatgcacatgtcaactgaacat
tttacatgccatttatgccaaagacagcatcctgggcaatatgattattataggaactat
gatgatctagagatgcatttccgccaagaacatttcctttgtgaagatgaagcatgcttg
gcgaagaaatttattgttttccagagtgaagcagaaatgaagagacataatgctattgag
catggggggaacatgtctcgttctaaaaggaatgctgcgcttcagatacccactagcttt
agatatcgaaggactgagcaagagcacagacgaggaagaggtcgtggttttcgtcctgat
acatctagcaaccaactagcaatggccattgaagcaagccttgagacagcaatggccaat
ggtagagttcgggattcttcttctactgctcgtgcaattgagagtggagaggtaaatcaa
cgcgacatagttacaggctcattggattcattgaatatcaattctggttctgaagcacct
tcaagatctctagcaacccagaaccaaagctctaggtctgccacaattttagaagaatct
tccttcccaccccttttagatagggagatccctgagccttcagctaggtatgctcaggct
cttactcagaactcaaggagtgcttccagacttggagaggactcatttcctcctctgcct
ggtgcaaataagaagaataaaccaaaagtgcagcaggggttagaaggtttagctaagaat
actcttgcagcccgcctccagcaacgtagcaaaggctctattacaataaattctgctcgg
tcgaggccatcagtgaatcataaacttgtcccttctagttctggaacatcttcgcaaatc
tggcctacaccaaatcaaggacttccgtcttcttctaattctcaacatcgggtaatacaa
ccagccagagaaaatgggtttgtatcaccaccttctgccaatactgcatggagtgcaagt
agctcaaacaggatgagacattctgcatcagctcctaacctcattgagaaaggatcttca
aaccaagctgcagcaaatacagcttctattgccagcagaagtcaagtgctgcctacaagc
aggcaatcagcaccaaatgtagaggatgttcggacagcaaacaagtccttggttgaaagg
atccgtgctgccttaggaatggacgaggataggtataccacctttaaaagcatttctgct
gaatatcgtcaaggacaaattaatacttgggagtatctttcctatgttgagcagtttggt
ctgtcacatctaattcttgaacttgcacggctcttacctgatgttaatagacagaaagaa
ctaactgatgcctatcatgccaatttacgtttcaaggatctgcaacaaaatgctggaagt
agtcctggtagatctagagagggtaatcctaaaaagaaaggaaagggtaaagttgtccat
aatgctgaaactagtactccaaaagatgcattgaccgataacattttagagactgtaaga
aagttacagtcgggttacaagcctcaggaaggaaatgttgaagttttatcaaaggatggg
taccgagctgccaaggagaagttgcaaatatcagctggggaatcgcattctaatccgagt
tctcttagtataaatacagctggcccaagtggcaatagagaaagagaatcccttttagat
ggtaccggtgccaaccagaacttgggttttgaaggcagcagcaaacaacggaagaagaca
gcgaagtttctgagagtccggttgggtgatggttcggcagcagcacttcttgaccttggt
cgtccaaatgctagccctgaacaattggagcaagaatctgctaataacccctctgagggg
ttgcctataaggggcgtttggcgaaacggcggtggtcaaagacttttttccaatactcag
agaaatccctcgaactga
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