KEGG   Typha angustifolia (narrow-leaf cattail): 140777945
Entry
140777945         CDS       T11061                                 
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14 isoform X1
  KO
K18663  activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tang03400]
    140777945
Enzymes [BR:tang01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     140777945
DNA repair and recombination proteins [BR:tang03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    140777945
SSDB
Motif
Pfam: Sec63 DEAD SNRNP200_wHTH DExH14_plug ResIII Helicase_C AAA_19 T2SSE DEXQc_Suv3 RAD51D_N
Other DBs
NCBI-GeneID: 140777945
NCBI-ProteinID: XP_072978491
LinkDB
Position
15:complement(join(3374282..3374356,3374663..3374794,3375608..3375757,3381991..3382161,3383809..3383976,3384114..3384209,3384653..3384715,3384812..3384977,3385064..3385131,3389410..3389553,3389631..3389786,3389866..3389931,3390077..3390268,3390352..3390501,3391218..3391308,3392610..3392698,3393531..3393593,3393725..3393850,3393930..3394019,3394093..3394215,3394319..3394435,3394514..3394717,3396104..3396184,3396288..3396368,3396464..3396565,3396659..3396883,3396968..3397123,3397223..3397435,3398463..3398612,3401085..3401207,3401302..3401367,3401716..3401781,3401848..3401979,3402062..3402136,3402765..3402848,3402937..3403089,3403185..3403250,3406759..3406920,3406997..3407113,3407199..3407270,3407437..3407496,3407611..3407727,3408907..3409209,3409276..3409380,3410576..3410641,3410730..3411183,3411460..3411628,3413310..3413362,3413439..3413545))
AA seq 2085 aa
MMTPLPRLTSSLRGHYDIDQAYLHRKSILRGLNSRRSSDDSELARKLVPSWDEATSEVRQ
AYKQFLGAVVELINDEVVSEEFSEVAKTVYDLFNDLDMESDATKRLIEKRGELQRLVGYN
VPDSSLQKVASLAQRLFSLQHTDNEAVFIQETVKDRSQDSSCEFGANFTFKAPSRFLVDV
SFNDDISLGNVNSSTKFRAEHYDGCMVSVSHNLVNNSGTVNLRWLKDACHMIVEGGSSQL
SGDELAMALCRVLLSSKAGDEIAADLLDLVGDGAFEMVQDILSHRKDLVDAIQHGLLILK
SEKISSSSQPRMPSYGTQVTVQTESEKQIDKLRRKEEKRSKRGAEYGSLDDFAADSFSSL
LLASERKQPLDDLIGTGEGPNYLLVNALPQGTMRLHKKGYEEVRIPPTPTAAMKPDERLI
EIRELDDFAQAAFEGYKSLNRIQSRIFHSTYYTNENILVCAPTGAGKTNIAMIAVLHEIK
QHLRDGILHKEEFKIVYVAPMKALAAEVTSAFSRRLSPLNLVVKELTGDMQLSKNELEET
QMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQ
SMIRIVGLSATLPNYLEVAQFLRVNTESGLFFFDSTYRPVPLAQQYIGISEKDYGRKLEM
FNNICYEKVADSVKQGHQAMVFVHSRKDTGKTARTLIETAVKSGELELFLNDKHPQYSLI
KKEVHKSRNRELVDFFESGFGIHHAGMLRSDRGLTERLFSDGLLKVLVCTATLAWGVNLP
AHTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITTHDKLAYYLRL
LTSQLPIESQFIGSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMKTNPLVYGIAWEE
VIGDPSLSSKQRSLIIDAARALDKAKMMRYDEKSGNFYCTELGRIASHFYLQYSSVETYN
EMLRRHMSDSEVINMVAHSSEFENIVVREEEQDELETLSRMACPLEVKGGTTDKHGKISI
LIQVRISRASMESFSLISDAAYISASLARIMRALFEICLRRGWCEMSSFMLEYCKAVDRQ
IWPHQHPLRQFDRDLSQEILRKLEERGANLDRLFEMEEKDIGALIRYAPGGKLVKQYLGY
FPHINLSATVSPITRTVLRVDLLITPDFVWKDRFHGTSERWWILVEDSENDHIYHSELFT
LTKRKARGESQKISFTIPIFEPHPPQYYLRAISDSWLQAETLFTVSFHNLMLPETQISHT
ELLDLQPLPVSSLGNKAFEDLYRFSHFNPIQTQTFHVLYHSGNNVLLGAPTGSGKTISAE
LAMLHLFNTQPDMKVVYIAPLKSIVRERMNDWRKRLVSLLGKKMVEMTGDYTPDLMALLS
ADIIISTPEKWDGISRNWHSRSYVMKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQT
ERPVRFVGLSTALANARDLAEWLGVGDSGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNS
MNKPAYAAICTHSPAKPVLIFVSSRRQTRLTALDLIQLAASDENPRQFLNMPENSLEMVL
SQVTDNNLRHTLQFGIGLHHAGLNDRDRSLVEELFSNNKIQILVCTSTLAWGVNLPAHLV
IIKGTEYYDGKAKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEP
FPVESSLREHLHDHINAEIVSGTIRHKEDAVHYLSWTYLFRRLVANPAYYGLEDTEDYVL
NSYLSRLVETTFEDLEDSGCIKMSDNSVEPLMLGSIASQYYLSYRTVSMFGSNIGPYTSI
EVFLNILSAASEFDELPVRHNEENMNKGLSEKVPFLVDEHRLDDPHVKANLLFQAHFSGT
ELPISDYVTDLKSVLDQSIRIIQAMIDISANSGWFSSTMTCMHLLQMVMQGLWFERDSSL
WMLPCMNDDLLSHLNKVGIFTVPDLLVLPYANLQRLLQPFSASELYKDLQYFPRIQLKVR
LQNKDAGVSKSPVLSIKLEQTNSRRSTSRAFAPRFPKVKEEAWWLVLGNVNNSELYALKR
ISFSERLVTQIELPQTPINLQETKLILVSDCYLGFEQERSLGKFS
NT seq 6258 nt   +upstreamnt  +downstreamnt
atgatgactccattgcctcgcctgacgagctccctcagaggccactacgacatcgatcag
gcgtatctccatcgcaaatccatcttgcgaggcctcaattcgaggagatcgagcgatgat
tcggagctcgcccgtaaattagtgccttcttgggatgaagctacaagtgaagtgcgtcaa
gcatataaacaatttctcggtgctgtagtggagttaattaatgatgaggtagtctcagaa
gaattctctgaggtggccaaaactgtgtatgatctatttaatgaccttgacatggaaagt
gatgccactaagaggcttattgagaaaaggggtgagctgcaaaggcttgtaggttacaac
gtacctgactctagtctacagaaagtagcttctttagctcagaggcttttttctttgcaa
cacacagacaatgaggccgtatttattcaggaaactgttaaagacagaagtcaagacagt
tcttgtgaatttggtgccaactttactttcaaagctccttcccgttttcttgttgatgtg
tcatttaatgatgacatatccttaggcaatgtcaattcttctactaaatttcgtgctgag
cactatgatggttgtatggtgtctgtaagtcacaatttggtcaacaacagtggcacggtg
aatttgagatggctgaaggatgcatgccatatgatagtggaggggggtagttcacagctt
tcaggagatgaacttgcaatggccttgtgcagggtgcttctttccagtaaagctggcgac
gagattgctgctgatttattggacctggttggtgatggtgcctttgaaatggtacaagat
atattgtcgcaccgcaaagatttagttgatgccattcaacatgggttgcttatactgaaa
tctgagaaaatatcttcaagcagtcaaccaaggatgccaagttatggcacacaggttact
gtacaaacagaaagtgaaaagcaaattgataaacttcggcggaaagaggaaaaacgtagc
aaacgtggggcagagtatggcagcctggatgattttgctgctgacagtttttcatctctt
cttctagcaagtgagagaaagcaacctttggatgatttgattgggacaggggaagggcca
aattatctgttagtaaatgctcttcctcaaggaacaatgagactgcataaaaaaggctat
gaagaagtcagaattccgccaactcccactgctgcaatgaaacctgatgagagactgatt
gagataagggaattagatgactttgctcaagctgctttcgagggatacaaatccctcaac
cgcattcagagtcgtatatttcactcaacatattatacaaacgagaatattctggtttgt
gcaccaactggtgctgggaagacaaacattgcgatgattgctgttcttcatgagattaaa
caacacttgagggatggcattttgcataaagaagaattcaaaattgtatatgttgctcca
atgaaggcattagcagcagaggtaacatctgcattcagtcgtcgcctgtctcccttgaat
ctggttgtcaaagaacttactggggacatgcagctgtccaagaatgagctcgaagaaacc
cagatgatagtgactactcctgaaaaatgggatgttattactcgcaaaagcagtgacatg
tcattgtcaatgctggttaaacttcttattattgatgaagtacacctgttgaatgatgat
agaggcccggtaatagaggcgctggttgcccggactctccgacaggttgagtcgacccaa
tcaatgatacgcattgttggcctatctgctacactacccaattatttagaggttgcacaa
tttttgcgggttaatacagaaagtgggctattcttttttgactcaacttaccgtcccgtt
cctctagcccaacaatacattgggattagcgagaaggactatggtagaaaacttgaaatg
ttcaacaatatatgctatgagaaggttgcagattcagttaaacaaggacatcaggctatg
gtttttgttcattcacgcaaggacacagggaaaactgccagaacactgattgagacagca
gtaaaatctggggaattggaattatttttaaatgataagcatccgcagtattctctaatt
aagaaagaagttcataagtccagaaatcgagaacttgttgatttctttgaatctggattt
ggcattcaccatgcagggatgctacgttctgacagaggcttaactgagcgcttattttct
gatggtttgttgaaggtccttgtttgtactgcaacattggcttggggagtaaatttacct
gctcatacagttgtcatcaagggtacacaaatatatgatcctaaggctggtggatggcgg
gacttgggcatgcttgatgtaatgcagatatttggacgtgctggaaggccgcagtttgac
aaaagtggtgaaggcattataatcactactcacgacaaattggcttattacttaagattg
ttgacaagccaactcccgatagaaagccagttcattggctcattgaaagacaatttgaat
gctgaggtggcgttaggtacagtcacaaatgtgaaggaagcttgtgcttggcttggatat
acatacttattcataaggatgaagacaaatcctttggtatatgggatagcatgggaggag
gttattggtgatccttccttgtcttccaagcaaagatctcttataattgatgctgcacgt
gcccttgacaaggcaaaaatgatgcgatatgacgagaaaagtggcaacttttactgcaca
gaacttggtcggatagcaagccacttttacctccagtattctagtgtagaaacttacaat
gagatgcttaggcgccacatgagtgatagtgaagtgatcaacatggtggctcattcctct
gaatttgaaaatattgttgttagagaggaagaacaagatgaacttgaaactttatccaga
atggcatgtccactagaagttaagggtggaacaactgacaagcatgggaagatttcaatt
ctcattcaggtgcgcatttcacgtgcttcaatggaaagcttctctttaatttctgatgca
gcatatattagtgcaagcttggctcgtattatgcgtgcattattcgaaatttgcttgcgt
agagggtggtgtgaaatgtcatctttcatgttggaatactgcaaggctgtggaccgccaa
atttggccccaccagcatcctcttaggcaattcgacagagacctttcacaagagatactg
aggaaacttgaggaaagaggtgctaatttggatcgccttttcgaaatggaggagaaagac
attggtgctttgattcgttatgctcctggaggaaagttggtcaaacaatatctaggatac
ttcccacacatcaacttatctgctactgtaagcccaattaccagaactgttcttagagtg
gatcttctcataacgcctgattttgtttggaaggatcgcttccatgggacctctgaacgt
tggtggattcttgttgaggattctgaaaatgaccacatttaccattcagagcttttcacg
ttgacaaagagaaaggcaagaggagaatctcaaaagatctcttttactataccaatattt
gagccacatccaccacaatactatcttcgtgccatttcggattcctggttacaagcagag
acactttttactgtttcttttcataaccttatgttgccagagacacaaatatcacatact
gaacttttagatttgcaacctctgcctgtgagttctcttgggaataaagcttttgaagat
ctgtacagattttcacatttcaatcctatccaaacacaaacttttcatgtcctgtatcac
tcaggtaataacgttctcctcggagctccaacaggaagtgggaaaactatatctgctgag
ctagcaatgcttcatcttttcaacacacaacctgacatgaaggttgtttacattgcccct
ctaaagtctattgttcgggaaagaatgaatgattggagaaagcggctcgtctctctgctt
ggaaagaagatggttgagatgactggtgactacactccagatcttatggctttactgtca
gctgacattataatatctactcctgaaaaatgggatggtattagtcgtaattggcatagt
cgaagctatgtgatgaaggttggactcatgatattggatgagatacatcttttgggagct
gatcgtggacctattcttgaggttattgtatccagaatgagatacatatcctcacagacg
gagcggcctgtacgatttgtaggtctatcaacagcattagctaatgcccgtgatttggct
gaatggttgggtgttggagacagtgggctcttcaatttcaagcctagtgtgaggcctgta
cctcttgaagttcacattcagggatatccaggaaagttttactgccccagaatgaatagc
atgaacaagcctgcatatgctgccatatgtacgcattcacctgcaaaaccagttcttatt
tttgtttcatctcgccgccagacaaggctgaccgcacttgatcttattcagcttgctgcc
tcagatgaaaatcccaggcagttcttgaatatgccagagaattccctcgaaatggttctt
tcacaagttactgataataacctgaggcatactctgcagttcggaattggactgcaccat
gcaggattaaatgatagagatagatccttggttgaggaacttttttcaaataacaagatc
cagatactggtgtgtactagtacattggcatggggggtaaaccttccagctcatcttgta
atcattaagggaactgaatactacgatggcaaagcaaaaagatatgttgattttcctatt
acagatatactgcaaatgatgggtcgtgcaggacgaccacagtatgaccagcatggaaaa
gctgttattcttgttcatgaaccaaaaaagagcttttacaagaagtttctttatgaacca
tttcctgttgaaagtagcctaagggagcatctacatgatcacataaatgcggagatcgtt
tctggcacaatccgtcataaggaggacgcagttcattacctttcatggacctatctattt
cgtcgtttggttgccaatccagcttattacgggttagaggacactgaggattatgttttg
aattcgtacctatcaaggttagtggaaactacatttgaggaccttgaggacagtggatgc
ataaagatgagtgacaattctgtagagcctttgatgttaggttcaattgcgtcccaatat
tacctcagttacaggacagtgtcgatgtttgggtcaaacattggaccatatacttcaatt
gaagttttcttgaacattctttctgctgcctctgaatttgacgaacttcctgtacggcat
aatgaggaaaatatgaataaaggattatctgagaaggttccttttctggttgatgagcac
cgccttgatgatccacatgtgaaagcaaatttactcttccaggcacacttttctgggaca
gaattacctatcagtgattatgtaactgacttgaaatccgttcttgatcaaagtatacgt
atcatacaggctatgattgacatatctgccaacagtggatggttttctagcacgatgact
tgtatgcatcttctgcaaatggtcatgcagggcttatggtttgagagagattcatcttta
tggatgttaccatgcatgaatgatgatcttctaagtcatctcaacaaagtaggcatattc
acagtgcccgacttgttagttctcccttatgcaaatttgcaaaggttgctccaaccattt
tctgcctctgagttgtacaaggatctacaatactttccacgtatacaattgaaggtgaga
cttcaaaacaaagatgccggagtatcaaaatctccagttcttagcattaaattggaacag
actaactctaggcgttcaacatcaagagcatttgctcctagatttcccaaggttaaagag
gaagcctggtggctagttttggggaatgttaacaactcagaactgtatgctctgaaaaga
ataagtttctcagaacgcttggttactcaaatagaattaccacaaacaccgatcaatctc
caggaaacaaagttgatactagtatcagactgttatcttggatttgaacaggagcgttcc
cttggaaaattcagttga

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