Typha angustifolia (narrow-leaf cattail): 140778071
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Entry
140778071 CDS
T11061
Name
(RefSeq) uncharacterized protein
KO
K12897
transformer-2 protein
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140778071
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tang01009
]
140778071
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tang03041
]
140778071
Protein phosphatases and associated proteins [BR:
tang01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140778071
Spliceosome [BR:
tang03041
]
Common components
Common spliceosomal components
SR proteins
140778071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
140778071
NCBI-ProteinID:
XP_072978704
LinkDB
All DBs
Position
15:join(4822746..4822768,4822849..4823007,4823187..4823289,4823791..4823940,4824531..4824594,4825256..4825431)
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AA seq
224 aa
AA seq
DB search
MSQSKEVRYTSRSITPPPTRRSRSRSPSRSRDRSPSRSRDRSPSRSRDRSPSRSRDRSRS
RSPEAKNPGNNLYVTGLSTRVTSSDLEKFFSKEGRVQECNVVLDPRSRESRGFAFVTMET
MEDADRCIKYLHRSVLEGRLITVEKAKRKRGRTPTPGKYCGARERRGRDRRRSRSYSPYR
PRERNRSRSRGRRERSHSPYARESHRRRRERSMSPTSNGNHRSD
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaatcaaaagaagtgaggtatacttcccgatccattacacctcctccaactagg
cgaagcagatcaaggtcaccatcaagatcaagggataggtcaccttcaagatcaagggat
aggtcaccatcaagatcaagagataggtcaccatcaagatcaagggataggagccgatct
aggagcccagaagcaaaaaatcctggaaataacttgtatgtgacaggattatcaacaaga
gttactagcagtgatcttgaaaagtttttcagtaaagaaggacgggttcaagaatgcaat
gtggttctggatcctcggtcaagagaatctcgtggttttgcctttgtaacaatggagaca
atggaagatgctgatcgctgcattaagtatctgcaccgttctgtacttgaaggtcgctta
atcacggtggagaaggcaaaaagaaaacgtggcaggacgccaacccctggaaagtactgt
ggagcaagagaaagaagaggtcgtgaccgcagacgttctcgcagttactctccttatcgt
cctagggaaaggaatcgctcccgttcaaggggccggagggagcggtcgcactcaccatat
gcaagagaatcacatagaaggcgcagggagcgatccatgtcacctaccagcaatgggaac
cacagatctgattag
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