KEGG   Typha angustifolia (narrow-leaf cattail): 140778120
Entry
140778120         CDS       T11061                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
  KO
K03129  transcription initiation factor TFIID subunit 4
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    140778120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tang03021]
    140778120
   03036 Chromosome and associated proteins [BR:tang03036]
    140778120
Transcription machinery [BR:tang03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     140778120
   Coactivators
    SAGA/TFTC/STAGA complex
     140778120
Chromosome and associated proteins [BR:tang03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     140778120
SSDB
Motif
Pfam: TAF4 RST SPMIP10-like
Other DBs
NCBI-GeneID: 140778120
NCBI-ProteinID: XP_072978785
LinkDB
Position
15:complement(join(3352205..3352377,3353292..3353550,3353613..3353678,3354521..3354664,3354747..3354803,3354884..3354939,3355052..3355187,3355275..3355365,3355468..3355598,3356824..3357556,3357648..3357805,3358008..3358103,3358527..3359074,3361401..3361506,3361613..3361651))
AA seq 930 aa
MDPSIMKLLEDDEDESLHSGADVEAFTAALNRDIGGDAASISQPFDADAGVLSQGSSSAS
KQALGQWQASSKEGNNDQQSQQKEQQDMLSMEQRLSQAQLIQQGNCQSDQFQQGNNQSEY
DQLQLQQEQSQSHQQQQTERNSEFVDKEKSTISEQSPLGSKQEISPSSEGQQQHMQQLSG
QEAAAANQASNAVKRMKAAPTIPFHMLIPILRPHLDKDRSMQLQAIFTKLRSNEVSKEDF
LRVIRNIVGDQMLRQAAHKVQMQLQAQAARNAQAIPNQYPTQASSQQLSSSGSRQFTEPQ
MFPQPESSTQIQKGLSQKPQELESMSDGKGLHAAQNYPVGSNVVNPEREISMISTQAVNK
QQQHPPLPQPSLSMYGTGNFHAHMYPKTVGPSTTALKPHGQDSHTRQIPDTQGVVSTPVG
AVQPLNAMNVRKYEMQNASNDTKRLHGGSLPSQSALQQNPVAWQLPGSKEQKTSAFPLTA
HVKPEVVDQPAEASHKSQFMGREGSSFGSLHLKQMNSTPGSMKDETLEKQSSRMGSTSAS
MTVASHNSSPLATQGESSMQIHTQISSTMPTPLAGSTMKTPQKKPSVGQKKPFEALGTSP
PVSSNKKQKTSGAFPDQSIEQLNDVTAVSGVNLREEEEQLLSAPKEESRASEATRRVVQE
EEERLILQKGPLQKKLAEIMSKCHLKGISSDVERCLSMCVEERLHGLISHLIRLSKQRVD
IEKSGHRIVVTSDIRRQILMINGKAKEEWDKKQAEEAGKLRKQNEAEGNGGGDSDKDKDE
GRSKNVKVNKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKREGLDGASSSQS
GKATNRKPLPSFGRSSREHHEAEKKGHSAAHGFGGMRRSGRSTMAMPHLKVARSISVKDV
ITVLEREPQMAKSPLIYRLYERLPGDPAAE
NT seq 2793 nt   +upstreamnt  +downstreamnt
atggatccatccatcatgaagcttcttgaagacgatgaggacgagagcttgcattctggc
gcggatgtggaggcattcactgccgcgctgaatcgggacatcggaggggatgctgcctcc
atctcccagccgtttgatgccgatgcaggtgttttatcgcaaggtagcagttctgcctca
aaacaagcactaggacaatggcaagcttctagcaaggaaggaaataatgaccaacaaagc
caacaaaaagaacagcaagatatgctttccatggagcagcgcttatcccaagcacagcta
atacagcaaggcaattgccaatcagatcaatttcaacaaggtaacaaccaatcagagtat
gatcagctgcagttacaacaagagcagtctcagtctcatcagcagcaacagacagaaaga
aattccgaatttgtagacaaagaaaagtctaccatttctgagcaaagtcctcttggctca
aaacaggaaattagtccctcttctgaaggtcagcagcagcatatgcagcagttgagtggt
caagaagcagctgctgctaaccaagcaagcaatgctgtaaagcggatgaaagctgcacca
acaataccattccacatgctaattccaatcttgcgccctcatcttgacaaagatagatca
atgcagcttcaggctatatttactaaactaaggagtaatgaagtcagcaaagaggacttt
ttaagggtcataaggaatattgttggggaccagatgcttagacaggcagctcataaagtc
caaatgcagcttcaagctcaggctgcacggaatgcacaggcaattccaaatcaatatcca
acacaagcctcctctcagcagctttcatccagtgggtctaggcagtttactgaaccacaa
atgtttccacaacctgagtcatcaactcagattcagaaaggcctcagccagaagcctcag
gaacttgagagtatgtcagatggtaaaggtttgcatgctgcgcaaaattatccagtcggc
agtaatgtagtcaatccagagagagaaatctcgatgatctcaactcaagcagtcaacaaa
cagcaacagcacccaccgcttccacaaccatctctctcaatgtatggaactggtaacttt
catgcccatatgtatcctaagacagtaggtccttcaacaactgctcttaaaccacacggt
caagattcacatacaaggcaaattccagatacccaaggagttgtttcgacaccagttggg
gcagttcagccattaaatgcaatgaatgtgcggaagtatgaaatgcaaaatgcctcgaat
gataccaaaagactacatggtggctctttgcctagccaatcagcactgcaacagaatcca
gttgcatggcagttaccggggtccaaggaacagaaaactagtgctttcccactaacagct
cacgtgaaaccagaagttgttgatcagcctgctgaagcttcgcataaatctcaattcatg
ggtcgagagggctcttcatttggttcattgcacctaaaacaaatgaattccactcctggt
tctatgaaggatgaaactttagaaaaacagtcatctagaatgggttctacttctgcaagc
atgactgtggcaagtcataattctagtcctctagcaacccaaggtgaatcaagcatgcag
atacacactcaaatttcatctaccatgccaacacctcttgctggctctactatgaaaact
ccccaaaagaaaccatctgttggccagaagaaaccatttgaagcactaggcacttcacca
ccagtgtcaagtaacaaaaaacagaagacatctggagcttttcctgaccaaagcattgaa
caactaaatgatgttacggctgttagtggcgttaatctgagggaagaagaagagcaacta
ttatctgcccccaaggaagagagccgagcttcagaagctactcgacgggttgtacaagaa
gaagaagaaaggctgattctgcagaaaggtccccttcagaaaaaactagcagaaatcatg
tcgaaatgtcatctaaaaggtataagcagtgacgtggagcgttgcctctcgatgtgtgta
gaggagcgtttacatggactgatcagtcatctaataagactgtcaaaacagagggttgat
attgagaaatcagggcatcgaattgttgtcacgtcagatattcggcgtcagattttgatg
ataaatggaaaagcaaaggaagagtgggataaaaagcaggctgaggaagctggaaagctt
cggaaacaaaatgaagcagagggtaatggaggaggagattcagataaagacaaggatgaa
ggtcgctccaagaatgtcaaggtaaataaggaggaagacgataaaatgaggacgactgct
gcaaatgttgctgctcgagctgctgttggaggagatgatatgctgtcaaagtggcaactc
atggctgaacaggctagacagaaacgtgaaggacttgatggggcttctagttcccaatca
ggtaaagcaacaaatcgcaagcctttaccaagctttggaaggagttcaagggaacaccat
gaagctgaaaagaaaggccactctgcagctcatggatttgggggcatgagaaggtctggg
aggagcaccatggcaatgcctcatttaaaagtcgcacgcagcatttcggtcaaggatgtg
attacagtccttgaaagggagcctcagatggcaaaatcacctctgatctaccgcttatat
gagagattacctggggatcctgctgcagagtag

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