Typha angustifolia (narrow-leaf cattail): 140778319
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Entry
140778319 CDS
T11061
Name
(RefSeq) DNA-3-methyladenine glycosylase isoform X1
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
140778319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tang03400
]
140778319
Enzymes [BR:
tang01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
140778319
DNA repair and recombination proteins [BR:
tang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
140778319
Prokaryotic type
140778319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-GeneID:
140778319
NCBI-ProteinID:
XP_072979068
LinkDB
All DBs
Position
15:complement(join(19033492..19033655,19033753..19033810,19034786..19034856,19036101..19036224,19036408..19036479,19036590..19036847))
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AA seq
248 aa
AA seq
DB search
MANTGKSHPRFKRTSPRKITRKKAAAIATREDGDGAGAAVPPQLPFFPESAAVLPQSFFE
VDSLELAPRLLGKFLRRDKVVLQITEVEAYRPNDSACHGRFGITSRTAPVFGPGGHAYVY
LCYGLHMMLNIVADKKGMGAAVLIRSCAPVSGLEIILERRGQKTEKPILLTGPGKVGQAL
GISTALSNHPLYKPGGLEVLDGPQPESILIGPRVGIEYALPEHVAAPWRFAIAGSPWISA
PKNTLRLP
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaccggcaaatctcatccccggttcaaaagaacgtccccgagaaagatcacg
aggaagaaggctgcagcgatcgccacgagagaagatggcgatggcgccggagctgccgtg
cctccacagttgcctttctttccggaatcggcggcggttttgccacaaagtttcttcgag
gtcgactccctcgaactcgctccacggctcctcggaaagtttcttcgtcgcgacaaggtt
gttctccagatcacggaggtcgaagcgtataggccgaatgactcggcttgtcacggcagg
tttggtatcacttcgcgcaccgctccagtgtttgggcccggaggtcatgcttatgtgtat
ctctgctatggccttcacatgatgctgaacattgtagctgataagaaaggaatgggcgca
gcagtgttgatccgctcgtgtgctcctgttagtggtttggagatcattctagaacgtcga
ggtcagaagactgagaagcctatcctactaacagggccaggaaaggttggccaagcgctg
gggatatcgactgcattgtcaaaccatcctctctacaaacctggtggtttggaagtatta
gatgggcctcaaccagaaagcattctgatcggtccccgggtgggcatcgagtatgctctg
ccggagcatgtcgctgcaccatggaggttcgccattgctggcagtccgtggattagtgcc
ccaaaaaacaccctccgcttgccatga
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