Typha angustifolia (narrow-leaf cattail): 140778481
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Entry
140778481 CDS
T11061
Name
(RefSeq) protein indeterminate-domain 7-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tang03000
]
140778481
Transcription factors [BR:
tang03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
140778481
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_4
zf-C2H2_STOP2_C
zf-C2H2_6
zf-BED
Motif
Other DBs
NCBI-GeneID:
140778481
NCBI-ProteinID:
XP_072979318
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Position
15:complement(join(16139223..16140051,16140358..16140754,16140839..16140956))
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AA seq
447 aa
AA seq
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MSHLTSASGEASGSSNQQSTFSYPDQNPVKKKRSLPGNPDPDAEVIALSPKTLMATNRFI
CEICNKGFQRDQNLQLHRRGHNLPWKLKQRSSKEVRKKVYICPEVTCVHHDPSRALGDLT
GIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCDCGTIFSRRDSFITHR
AFCDALAEENARAISANPLANNPPLLFSQPTSANDPSSLSHTALQTQFPHSLLMRATEMN
ANTIGSNGGLQELSLKREQQHFNMKPDIPSWLACQGPTSLSQLQQEYINANSSPLPPSFP
TQRQASIPSPHMSATALLQKAAQMGATHNTTEFGLGFSPHQEMGSSGGFGHGSPSLLHQD
MMMNPLPSASGFDGSSLDAFRGMMRSKREGNSSMESNFGGKNDEPTRDFLGLRAFSHRDI
LNMAGLDPSMSSSSYEQPQQNKKPWHG
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatctaacatctgcatccggagaagcaagtggttcttccaaccagcagtccacc
ttttcctacccagaccaaaatccagtgaagaagaagaggagccttccaggaaatccagat
ccagatgctgaggtgatagcactctcacccaagaccctcatggctaccaacaggttcatc
tgtgagatttgcaacaagggcttccaaagggaccaaaacctgcagctccacaggagaggc
cacaacctcccatggaagctgaagcaaaggagcagcaaggaggtgaggaagaaggtgtac
atctgccctgaggtcacttgtgttcaccatgacccttctagggcacttggagacctcact
gggatcaagaagcacttcagcaggaagcatggggagaagaagtggaagtgtgagaagtgc
tccaagaagtatgctgtgcaatctgattggaaagcccactccaagatttgtggcactagg
gagtataaatgtgactgtggcaccatcttctcaaggagggatagctttatcacccacaga
gccttctgtgatgccttggcagaagaaaatgcaagagccatctcagcaaatcccctggct
aacaacccaccactcctcttctctcaacccacatcagccaatgacccctcttctctctct
cacaccgctttgcagacccagtttcctcacagcttgttgatgagagccacagagatgaac
gccaataccataggctccaatggcggcctacaagagctatcgctcaaaagagaacaacag
cacttcaacatgaaaccagatataccttcgtggctagcttgccagggccccacatcccta
agccagttgcaacaagagtacattaatgccaactcatctccacttcccccttctttcccc
acacaacgccaagcttccataccctctcctcacatgtcagctactgctttgctccagaag
gcagctcagatgggtgcaactcacaatactactgagtttggccttggcttctccccacac
caagagatgggtagtagtggtggttttggacacgggtcgccatctcttcttcatcaagac
atgatgatgaatcctctcccctcagcttctggctttgatgggtcttctctagatgcattc
agagggatgatgagatcaaagagggaaggcaacagtagtatggagagcaattttggtggt
aagaatgatgagcccactagagacttcttaggtctgagagccttctcacacagggatatt
cttaacatggctggtttggatccttccatgagttcttcctcctatgagcaaccccaacaa
aataagaagccatggcatggttag
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